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mol2morgan_fingerprint: remove deprecated fp function #83

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merged 8 commits into from
Sep 23, 2024

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JochenSiegWork
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@JochenSiegWork JochenSiegWork commented Sep 9, 2024

Fixes #78

  • Remove AllChem.GetMorganFingerprintAsBitVect
    from the code because it is deprecated.
  • Add a test to ensure the bit2atom mapping works
    as intended.

    - Remove AllChem.GetMorganFingerprintAsBitVect
      from the code because it is deprecated.
    - Add a test to ensure the bit2atom mapping works
      as intended.
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Minor chagnes

* fix molsanitize exception error catching

* linting

* isort on other stuff
* fix molsanitize exception error catching

* linting

* isort on other stuff

* add inchitomol element
* docu: update readme, add image, add feature calc notebook

* readme: add feature calculation example

* readme: add published Molpipeline paper link

* notebooks: add header to feature calculation
@JochenSiegWork JochenSiegWork merged commit 22efd0d into main Sep 23, 2024
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Replace deprecated morgan FP function with MorganGenerator
3 participants