Merge branch 'dev' of ssh://github.com/reproducible-biomedical-modeli…

…ng/Biosimulations_tellurium into dev
biosimulators · Aug 19, 2021 · 7aa2930 · 7aa2930
2 parents 7340e75 + 57d621c
commit 7aa2930
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diff --git a/docs/_static/basic.css b/docs/_static/basic.css
@@ -819,7 +819,7 @@ div.code-block-caption code {
 
 table.highlighttable td.linenos,
 span.linenos,
-div.doctest > div.highlight span.gp {  /* gp: Generic.Prompt */
+div.highlight span.gp {  /* gp: Generic.Prompt */
   user-select: none;
   -webkit-user-select: text; /* Safari fallback only */
   -webkit-user-select: none; /* Chrome/Safari */

diff --git a/docs/_static/doctools.js b/docs/_static/doctools.js
@@ -301,12 +301,14 @@ var Documentation = {
               window.location.href = prevHref;
               return false;
             }
+            break;
           case 39: // right
             var nextHref = $('link[rel="next"]').prop('href');
             if (nextHref) {
               window.location.href = nextHref;
               return false;
             }
+            break;
         }
       }
     });

diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.1.11',
+    VERSION: '0.1.12',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/about.html b/docs/about.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>About BioSimulators-tellurium &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>About BioSimulators-tellurium &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -84,7 +84,7 @@ <h3>Related Topics</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>

diff --git a/docs/genindex.html b/docs/genindex.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>Index &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -75,7 +75,7 @@ <h3>Related Topics</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -104,6 +104,7 @@ <h1 id="index">Index</h1>
  <a href="#B"><strong>B</strong></a>
  | <a href="#C"><strong>C</strong></a>
  | <a href="#E"><strong>E</strong></a>
+ | <a href="#G"><strong>G</strong></a>
  | <a href="#M"><strong>M</strong></a>
  | <a href="#P"><strong>P</strong></a>
 
@@ -155,7 +156,19 @@ <h2 id="C">C</h2>
 <h2 id="E">E</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.core.exec_sedml_docs_in_combine_archive">exec_sedml_docs_in_combine_archive() (in module biosimulators_tellurium.core)</a>
+      <li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.exec_sedml_docs_in_combine_archive">exec_sedml_docs_in_combine_archive() (in module biosimulators_tellurium)</a>
+
+      <ul>
+        <li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.core.exec_sedml_docs_in_combine_archive">(in module biosimulators_tellurium.core)</a>
+</li>
+      </ul></li>
+  </ul></td>
+</tr></table>
+
+<h2 id="G">G</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.get_simulator_version">get_simulator_version() (in module biosimulators_tellurium)</a>
 </li>
   </ul></td>
 </tr></table>

diff --git a/docs/index.html b/docs/index.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>BioSimulators-tellurium documentation &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>BioSimulators-tellurium documentation &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -77,7 +77,7 @@ <h3>Related Topics</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>

diff --git a/docs/installation.html b/docs/installation.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Installation instructions &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>Installation instructions &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -83,7 +83,7 @@ <h3>Related Topics</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>

diff --git a/docs/py-modindex.html b/docs/py-modindex.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>Python Module Index &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -78,7 +78,7 @@ <h3>Related Topics</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>

diff --git a/docs/search.html b/docs/search.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Search &#8212; BioSimulators-tellurium 0.1.11 documentation</title>
+    <title>Search &#8212; BioSimulators-tellurium 0.1.12 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
 
@@ -111,7 +111,7 @@ <h1 id="search-documentation">Search</h1>
 
 
   <form action="" method="get">
-    <input type="text" name="q" aria-labelledby="search-documentation" value="" />
+    <input type="text" name="q" aria-labelledby="search-documentation" value="" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
     <input type="submit" value="search" />
     <span id="search-progress" style="padding-left: 10px"></span>
   </form>

diff --git a/docs/searchindex.js b/docs/searchindex.js