updates to cpu resources

biosimulators · Sep 6, 2024 · ee9c203 · ee9c203
1 parent 9de754e
commit ee9c203
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Showing 4 changed files with 7 additions and 7 deletions.
diff --git a/compose_worker/Dockerfile-compose_worker b/compose_worker/Dockerfile-compose_worker
@@ -24,12 +24,13 @@ COPY . /app/worker
 RUN poetry add \
     meson-python \
     meson ninja \
-    && poetry add pysces --extras=sbml
+    && poetry add pysces --extras=sbml \
+    && poetry add biosimulators-utils --extras=logging
 
 RUN /app/assets/install_deps.sh /app/worker/requirements.worker.txt
 
 # mv biosimulator processes artifact TODO: update this.
-RUN mv /app/biosimulator_processes /app/worker/biosimulator_processes
+# RUN mv /app/biosimulator_processes /app/worker/biosimulator_processes
 
 WORKDIR /app/worker
 

diff --git a/compose_worker/requirements.worker.txt b/compose_worker/requirements.worker.txt
@@ -2,4 +2,3 @@ biosimulators-amici
 biosimulators-copasi
 biosimulators-pysces
 biosimulators-tellurium
-biosimulators-utils[logging]
diff --git a/docker-compose.yaml b/docker-compose.yaml
@@ -15,7 +15,7 @@ services:
     build:
       context: ./compose_api
       dockerfile: ./Dockerfile-compose_api
-    image: ghcr.io/biosimulators/bio-check-compose_api:1.10.1
+    image: ghcr.io/biosimulators/bio-check-compose_api:1.11.0
     container_name: api
     environment:
       - MONGO_URI=mongodb://mongodb:27017/?retryWrites=true&w=majority&appName=bio-compose
@@ -34,7 +34,7 @@ services:
       context: ./compose_worker
       dockerfile: ./Dockerfile-compose_worker
 
-    image: ghcr.io/biosimulators/bio-check-compose_worker:1.10.2
+    image: ghcr.io/biosimulators/bio-check-compose_worker:1.11.0
     container_name: worker
     environment:
       - MONGO_URI=mongodb://mongodb:27017/?retryWrites=true&w=majority&appName=bio-compose

diff --git a/kustomize/base/worker.yaml b/kustomize/base/worker.yaml
@@ -21,10 +21,10 @@ spec:
           resources:
             requests:
               memory: "400Mi"
-              cpu: "200m"
+              cpu: "500m"
             limits:
               memory: "2000Mi"
-#              cpu: "500m"
+              cpu: "1500m"
           envFrom:
             - configMapRef:
                 name: worker-config