updated for release and docker

biosimulators · Mar 6, 2024 · 745f174 · 745f174
1 parent e907022
commit 745f174
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Showing 5 changed files with 14 additions and 11 deletions.
diff --git a/.idea/workspace.xml b/.idea/workspace.xml
diff --git a/Dockerfile → container-assets/Dockerfile b/Dockerfile → container-assets/Dockerfile
@@ -10,14 +10,16 @@ ENV DEBIAN_FRONTEND=noninteractive
  # STORAGE_GCS_CREDENTIALS_FILE="/app/secret/gcs_credentials.json" \
  # STORAGE_LOCAL_CACHE_DIR="/app/scratch"
 
+RUN cd ..
+
 WORKDIR /app
 
 # copy and make dirs
 # COPY ./biosimulator_processes /app/biosimulator_processes
-COPY ./notebooks /app/notebooks
+COPY ../notebooks /app/notebooks
 
 # copy files
-COPY ./pyproject.toml ./poetry.lock ./data ./scripts/trust-notebooks.sh /app/
+COPY ./container-assets/pyproject.toml ./container-assets/poetry.lock ./data ./scripts/trust-notebooks.sh /app/
 # COPY ./scripts/xvfb-startup.sh /xvfb-startup.sh
 
 VOLUME /app/data

diff --git a/poetry.lock → container-assets/poetry.lock b/poetry.lock → container-assets/poetry.lock
diff --git a/pyproject.toml → container-assets/pyproject.toml b/pyproject.toml → container-assets/pyproject.toml
diff --git a/scripts/build-container.sh b/scripts/build-container.sh
@@ -15,8 +15,10 @@ docker buildx inspect --bootstrap
 
 set -e
 
-docker build --platform linux/amd64 \
- -t ghcr.io/biosimulators/biosimulator-processes:"${version}" .
+docker build \
+ --platform linux/amd64 \
+ --file container-assets/Dockerfile \
+ -t ghcr.io/biosimulators/biosimulator-processes:"${version}" .
 
 if [ "${run}" == "-r" ]; then
  ./scripts/run-container.sh "${version}"