update colors

bioMONAI/callbacks.py

@@ -1,3 +1,5 @@
+"""Event handlers"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/07_callbacks.ipynb.
 
 # %% auto 0

bioMONAI/core.py

@@ -1,3 +1,5 @@
+"""bioMONAI core functions"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/00_core.ipynb.
 
 # %% auto 0
@@ -224,8 +226,8 @@ def plot_histogram_and_kde(data, stats, bw_method, fn_name):
     plt.fill_between(x, y, color=gauss_color, alpha=0.3)
 
     # Add vertical lines for key statistics with formatted significant digits
-    plt.axvline(stats["Mean"], color='gold', linestyle='--', linewidth=1.5, label=f'Mean: {format_sig(stats["Mean"])}')
-    plt.axvline(stats["Median"], color='green', linestyle='--', linewidth=1.5, label=f'Median: {format_sig(stats["Median"])}')
+    plt.axvline(stats["Mean"], color='crimson', linestyle='--', linewidth=1.5, label=f'Mean: {format_sig(stats["Mean"])}')
+    plt.axvline(stats["Median"], color='steelblue', linestyle='--', linewidth=1.5, label=f'Median: {format_sig(stats["Median"])}')
     plt.axvline(stats["Q1"], color='purple', linestyle=':', linewidth=1.5, label=f'Q1: {format_sig(stats["Q1"])}')
     plt.axvline(stats["Q3"], color='purple', linestyle=':', linewidth=1.5, label=f'Q3: {format_sig(stats["Q3"])}')
 

bioMONAI/data.py

@@ -1,3 +1,5 @@
+"""Data classes and functions"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/01_data.ipynb.
 
 # %% auto 0

bioMONAI/datasets.py

@@ -1,3 +1,5 @@
+"""Download and store datasets"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/08_datasets.ipynb.
 
 # %% auto 0

bioMONAI/io.py

@@ -1,3 +1,5 @@
+"""input/output management"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/02_io.ipynb.
 
 # %% auto 0

bioMONAI/losses.py

@@ -1,3 +1,5 @@
+"""A set of custom loss functions"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/03_losses.ipynb.
 
 # %% auto 0

bioMONAI/metrics.py

@@ -1,3 +1,5 @@
+"""Metric tracking and analysis tools"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/06_metrics.ipynb.
 
 # %% auto 0

bioMONAI/nets.py

@@ -1,3 +1,5 @@
+"""Neural networks"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/04_nets.ipynb.
 
 # %% auto 0

bioMONAI/transforms.py

@@ -1,3 +1,5 @@
+"""Data transformations and augmentations for 2D and 3D BioImages"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/05_transforms.ipynb.
 
 # %% auto 0

bioMONAI/visualize.py

@@ -1,3 +1,5 @@
+"""Data visualization"""
+
 # AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/09_visualize.ipynb.
 
 # %% auto 0