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Releases: brentp/jigv

update igv.js

22 Mar 15:34
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this updates igv.js (thanks @juanesarango #21)

bed

01 Jul 12:47
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bed

v0.1.9

  • handle empty lines in --sites file
  • bump igv.js to 2.12.2
  • warn when no genome or fasta is specified
  • better for BED, e.g. show a bar for each bed region

annotations headers

01 Jul 13:38
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v0.1.8

  • always output header for --annotation files (fixes VCF)

change --template to --prefix

24 Jun 09:48
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v0.1.7

change --template to --prefix

minor

18 Jun 11:40
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v0.1.6

allow writing to stdout

add --template to support any number of variants

17 Jun 13:02
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see: https://github.com/brentp/jigv#template

v0.1.5

  • add --template option to allow for each variant or site to be written to a separte js (or base64) file.
    this allows a user to scale to as many variants as they like.

handle error on AB

15 Jun 15:31
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v0.1.4

handle and report weird AD values

flank and linking

15 Jun 10:59
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v0.1.3

  • expose --flank option so user can specify size of flanking region to extract
  • allow linking by chrom:pos:ref:alt (in addition to region chrom:start-stop)

minor ergonomic changes

14 Jun 12:55
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v0.1.2

  • if no --sample use first affected sample from pedigree file

bugfix and bed format

10 Jun 08:06
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static binary below. just download, chmod +x and run (on linux)

v0.1.1

  • support BED as input