Popular repositories Loading

1. Dicom_RT_and_Images_to_Mask Dicom_RT_and_Images_to_Mask Public

   Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

   Python 92 28

2. Segmentation_Evaluation_Tools Segmentation_Evaluation_Tools Public

   Tools for quantitative evaluation of prediction segmentations (Dice, Jaccard, volume similarity, false_negative, false_positive, mean, median, max, and std surface distances)

   Python 8 1

3. RegisteringImages RegisteringImages Public

   Tools for registering images with Dicom Registration files

   Python 8 4

4. Dicom_Data_to_Numpy_Arrays Dicom_Data_to_Numpy_Arrays Public

   For parallel creation of RT structures into numpy arrays for deep learning training purposes

   Python 6

5. Cyclical_Learning_Rate Cyclical_Learning_Rate Public

   Code adapted from https://github.com/bckenstler/CLR

   Jupyter Notebook 4 2

6. AAPM_Summer_School_Workshop AAPM_Summer_School_Workshop Public

   This is a deformable registration code, adapted from the voxelmorph code available here: https://github.com/voxelmorph/voxelmorph

   Jupyter Notebook 3