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fix imports and fix removal of None from NormalizationMethod #8

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Oct 25, 2023
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9 changes: 2 additions & 7 deletions src/main.rs
Original file line number Diff line number Diff line change
@@ -1,15 +1,10 @@
use std::fmt::format;
use std::io::{BufReader, Write};
use std::str::FromStr;
use std::{fs::File, time::Instant};

use bincode::deserialize_from;

use clap::{Args, Parser};
use clap::{Subcommand, ValueEnum};
use owo_colors::{OwoColorize, Stream::Stdout, Style};
use std::io::{BufReader, Write};
use std::{fs::File, time::Instant};
use webgestalt_lib::methods::gsea::GSEAConfig;
use webgestalt_lib::methods::multiomics::NormalizationMethod;
use webgestalt_lib::methods::ora::ORAConfig;
use webgestalt_lib::readers::read_rank_file;

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1 change: 1 addition & 0 deletions webgestalt_lib/src/methods/multiomics.rs
Original file line number Diff line number Diff line change
Expand Up @@ -50,6 +50,7 @@ pub enum NormalizationMethod {
MedianRank,
MedianValue,
MeanValue,
None,
}

/// Run a multiomics analysis, using iehter the max/mean median ratio or a typical meta analysis
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