[pre-commit.ci] pre-commit autoupdate #588
Triggered via pull request
December 16, 2024 23:56
pre-commit-ci[bot]
Status
Failure
Total duration
49m 45s
Artifacts
–
Annotations
4 errors and 58 warnings
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3.8-build
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
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docker (R-notebook)
buildx failed with: ERROR: failed to solve: process "/bin/bash -o pipefail -c conda install --quiet --yes 'r-base=4.0.3' 'r-caret=6.*' 'r-crayon=1.3*' 'r-devtools=2.3*' 'r-forecast=8.13*' 'r-hexbin=1.28*' 'r-htmltools=0.5*' 'r-htmlwidgets=1.5*' 'r-irkernel=1.1*' 'r-nycflights13=1.0*' 'r-randomforest=4.6*' 'r-rcurl=1.98*' 'r-rmarkdown=2.6*' 'r-rodbc=1.3*' 'r-rsqlite=2.2*' 'r-shiny=1.5*' 'r-tidyverse=1.3*' 'unixodbc=2.3.*' 'r-tidymodels=0.1*' 'r-rgdal=1.5*' 'r-rjson=0.2*' 'r-units=0.6*' 'r-rjags=4*' 'r-r2jags=0.6*' 'r-sf=0.9*' 'r-tweenr=1.0*' 'r-dtplyr=1.0*' 'r-gganimate=1.0*' 'r-remotes=2.2*' 'r-rgeos=0.5*' 'r-lsd=4.' 'r-mass=7.*' 'r-sdmtools=1.1*' 'r-raster=3.4*' 'r-mumin=1.43*' 'r-rnetcdf=2.4*' 'r-scales=1.1*' 'r-car=3.0*' 'r-pscl=1.5*' 'r-nlme=3.1*' && conda clean --all -f -y && fix-permissions \"${CONDA_DIR}\" && fix-permissions \"/home/${NB_USER}\"" did not complete successfully: exit code: 1
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docker (python-notebook)
The job was canceled because "R-notebook" failed.
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docker (python-notebook)
The operation was canceled.
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3.8-build
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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3.8-build
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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3.8-build
Mamba support is still experimental and can result in differently solved environments!
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3.8-build
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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3.8-build
info libmamba ****************** Backtrace Start ******************
debug libmamba Loading configuration
trace libmamba Compute configurable 'create_base'
trace libmamba Compute configurable 'no_env'
trace libmamba Compute configurable 'no_rc'
trace libmamba Compute configurable 'rc_files'
trace libmamba Compute configurable 'root_prefix'
warning libmamba You have not set the root prefix environment variable.
To permanently modify the root prefix location, either:
- set the 'MAMBA_ROOT_PREFIX' environment variable
- use the '-r,--root-prefix' CLI option
- use 'mamba shell init ...' to initialize your shell
(then restart or source the contents of the shell init script)
Continuing with default value: "/usr/share/miniconda"
trace libmamba Get RC files configuration from locations up to HomeDir
trace libmamba Configuration not found at '/home/runner/.mambarc'
trace libmamba Configuration not found at '/home/runner/.mamba/mambarc.d'
trace libmamba Configuration not found at '/home/runner/.mamba/mambarc'
trace libmamba Configuration not found at '/home/runner/.mamba/.mambarc'
trace libmamba Configuration not found at '/home/runner/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/home/runner/.config/mamba/mambarc'
trace libmamba Configuration not found at '/home/runner/.config/mamba/.mambarc'
trace libmamba Configuration found at '/home/runner/.condarc'
trace libmamba Configuration not found at '/home/runner/.conda/condarc.d'
trace libmamba Configuration not found at '/home/runner/.conda/condarc'
trace libmamba Configuration not found at '/home/runner/.conda/.condarc'
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3.8-build
trace libmamba Configuration not found at '/home/runner/.config/conda/condarc.d'
trace libmamba Configuration not found at '/home/runner/.config/conda/condarc'
trace libmamba Configuration not found at '/home/runner/.config/conda/.condarc'
trace libmamba Configuration not found at '/usr/share/miniconda/.mambarc'
trace libmamba Configuration not found at '/usr/share/miniconda/condarc.d'
trace libmamba Configuration not found at '/usr/share/miniconda/condarc'
trace libmamba Configuration found at '/usr/share/miniconda/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not found at '/etc/conda/condarc'
trace libmamba Configuration not found at '/etc/conda/.condarc'
trace libmamba Update configurable 'no_env'
trace libmamba Compute configurable 'envs_dirs'
trace libmamba Compute configurable 'file_specs'
debug libmamba No env 'name' specified in YAML spec file '/home/runner/work/forest-risks/forest-risks/envs/python-notebook/setup-miniconda-patched-environment.yml'
trace libmamba Compute configurable 'spec_file_env_name'
trace libmamba Compute configurable 'env_name'
trace libmamba Compute configurable 'use_default_prefix_fallback'
trace libmamba Compute configurable 'use_root_prefix_fallback'
trace libmamba Compute configurable 'use_target_prefix_fallback'
trace libmamba Compute configurable 'target_prefix'
trace libmamba Get RC files configuration from locations up to TargetPrefix
trace libmamba Configuration not found at '/usr/share/miniconda/envs/carbonplan/.mambarc'
trace libmamba Configuration not found at '/usr/share/miniconda/envs/carbonplan/condarc.d'
trace libmamba Configuration not found at '/usr/share/miniconda/envs/carbonplan/condarc'
trace libmamba Configuration not found at '/usr/share/miniconda/envs/carbonplan/.condarc'
trace libmamba Configuration not found at '/home/runner/.mambarc'
trace libmamba Configuration not found at '/home/runner/.mamba/mambarc.d'
trace libmamba Configuration not found at '/home/runner/.mamba/mambarc'
trace libmamba Configuration not found at '/home/runner/.mamba/.mambarc'
trace libmamba Configuration not found at '/home/runner/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/home/runner/.config/mamba/mambarc'
trace libmamba Configuration not found at '/home/runner/.config/mamba/.mambarc'
trace libmamba Configuration found at '/home/runner/.condarc'
trace libmamba Configuration not found at '/home/runner/.conda/condarc.d'
trace libmamba Configuration not found at '/home/runner/.conda/condarc'
trace libmamba Configuration not found at '/home/runner/.conda/.condarc'
trace libmamba Configuration not found at '/home/runner/.config/conda/condarc.d'
trace libmamba Configuration not found at '/home/runner/.config/conda/condarc'
trace libmamba Configuration not found at '/home/runner/.config/conda/.condarc'
trace libmamba Configuration not found at '/usr/share/miniconda/.mambarc'
trace libmamba Configuration not found at '/usr/share/miniconda/condarc.d'
trace libmamba Configuration not found at '/usr/share/miniconda/condarc'
trace libmamba Configuration found at '/usr/share/miniconda/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not foun
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docker (R-notebook)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
Unexpected input(s) 'tag-sha', valid inputs are ['images', 'tags', 'flavor', 'labels', 'sep-tags', 'sep-labels', 'bake-target', 'github-token']
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (R-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
Unexpected input(s) 'tag-sha', valid inputs are ['images', 'tags', 'flavor', 'labels', 'sep-tags', 'sep-labels', 'bake-target', 'github-token']
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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docker (python-notebook)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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