bug fixes for setup.py #4

	name: Publish cgat-apps wheels to PyPI and TestPyPI

	on:
	push:
	branches:
	- v[0-9]+.[0-9]+.x
	tags:
	- v*
	release:
	types:
	- published

	jobs:

	build_sdist:

	runs-on: ${{ matrix.os }}-latest
	strategy:
	matrix:
	os: [ubuntu, macos]
	python-version: [3.10]

	steps:
	- name: Checkout cgat-apps
	uses: actions/checkout@v2

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v2
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install prerequisite Python libraries
	run: \|
	python -m pip install --upgrade pip
	pip install wheel

	- name: Create source distribution
	run: python setup.py sdist bdist_wheel

	- uses: actions/upload-artifact@v2
	with:
	path: dist/*.tar.gz

	- uses: actions/upload-artifact@v2
	with:
	path: dist/*.whl

	upload_pypi:

	needs: [build_sdist]
	runs-on: ubuntu-latest

	steps:
	- name: Get Artifacts
	uses: actions/download-artifact@v2
	with:
	name: artifact
	path: dist

	- name: Publish distribution to Test PyPI
	if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v')
	uses: pypa/gh-action-pypi-publish@master
	with:
	user: __token__
	password: ${{ secrets.TEST_PYPI_API_TOKEN }}
	repository_url: https://test.pypi.org/legacy/

	- name: Publish distribution to PyPI
	if: github.event_name == 'release' && github.event.action == 'published'
	uses: pypa/gh-action-pypi-publish@master
	with:
	password: ${{ secrets.PYPI_API_TOKEN }}

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