Branch to update to new dgl version #1777
Workflow file for this run
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name: CI | |
on: | |
pull_request: | |
branches: | |
- main | |
push: | |
branches: | |
- main | |
schedule: | |
# Nightly tests run on master by default: | |
# Scheduled workflows run on the latest commit on the default or base branch. | |
# (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule) | |
- cron: "0 0 * * *" | |
concurrency: | |
group: "${{ github.workflow }}-${{ github.ref }}" | |
cancel-in-progress: true | |
defaults: | |
run: | |
shell: bash -l {0} | |
jobs: | |
test: | |
name: ${{ matrix.os }}, Python ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }}-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
os: ['ubuntu'] | |
python-version: | |
- "3.10" | |
- "3.9" | |
env: | |
OPENMM: ${{ matrix.cfg.openmm }} | |
OE_LICENSE: ${{ github.workspace }}/oe_license.txt | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: devtools/conda-envs/espaloma.yaml | |
cache-environment: true | |
cache-downloads: true | |
create-args: >- | |
python=${{ matrix.python-version }} | |
- name: Additional info about the build | |
shell: bash | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
- name: Environment Information | |
run: | | |
micromamba info | |
micromamba list | |
micromamba --version | |
- name: Install package | |
run: | | |
python -m pip install --no-deps -e . | |
- name: Run tests | |
run: | | |
pytest -v --cov=espaloma --cov-report=xml --color=yes espaloma/ | |
- name: CodeCov | |
uses: codecov/codecov-action@v3 | |
if: ${{ github.repository == 'choderalab/espaloma' | |
&& github.event_name == 'pull_request' }} | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
file: ./coverage.xml | |
flags: unittests | |
yml: ./.codecov.yml | |
fail_ci_if_error: False | |
verbose: True |