Finish implementation

cidgoh · Aug 22, 2024 · 59e17b2 · 59e17b2
1 parent 3093260
commit 59e17b2
Showing 1 changed file with 10 additions and 15 deletions.
diff --git a/web/templates/grdi/export.js b/web/templates/grdi/export.js
@@ -112,22 +112,22 @@ export default {
  status: 'published',
  method: function (dh) {
  const ExportHeaders = new Map([
- ['*sample_name', []],
+ ['sample_name', []],
  ['sample_title', []],
  ['bioproject_accession', []],
- ['*strain', []],
+ ['strain', []],
  ['isolate_name_alias', []],
  ['culture_collection', []],
  ['reference_material', []],
- ['*organism', []],
- ['*collected_by', []],
- ['*collection_date', []],
+ ['organism', []],
+ ['collected_by', []],
+ ['collection_date', []],
  ['cult_isol_date', []],
- ['*geo_loc_name', []],
- ['*isolation_source', []],
- ['*source_type', []],
+ ['geo_loc_name', []],
+ ['isolation_source', []],
+ ['source_type', []],
  ['samp_collect_device', []],
- ['*purpose_of_sampling', []],
+ ['purpose_of_sampling', []],
  ['project_name', []],
  ['ifsac_category', []],
  ['lat_lon', []],
@@ -196,11 +196,6 @@ export default {
  ['extr_weather_event', []],
  ['mechanical_damage', []]
  ]);
-//
-//
-// EXAMPLE
-// environmental_siteXenv_local_scale = "Agricultural Field [ENVO:00000114], Alluvial fan [ENVO:00000314], Artificial wetland [ENVO:03501406], Breeding ground [ENVO:03501441], Creek [ENVO:03501405], Farm [ENVO:00000078], Beef farm [ENVO:03501443], Breeder farm [ENVO:03501384], Dairy farm [ENVO:03501416], Feedlot [ENVO:01000627], Beef cattle feedlot [ENVO:03501444], Fish farm [ENVO:00000294], Research farm [ENVO:03501417], Freshwater environment [ENVO:01000306], Hatchery [ENVO:01001873], Poultry hatchery [ENVO:01001874], Lake [ENVO:00000020], Manure lagoon (Anaerobic lagoon) [ENVO:03501423], Manure pit [ENVO:01001872], Marine environment [ENVO:01000320], Benthic zone [ENVO:03501440], Pelagic zone [ENVO:00000208], Park [ENVO:00000562], Pond [ENVO:00000033], Reservoir [ENVO:00000025], Irrigation reservoir [ENVO:00000450], River [ENVO:00000022], Roost (bird) [ENVO:03501439], Rural area [ENVO:01000772], Slough [ENVO:03501438], Stream [ENVO:00000023], Tributary [ENVO:00000495], Water surface [ENVO:01001191], Woodland area [ENVO:00000109]".split(",")
-
 
  const sourceFields = dh.getFields(dh.table);
  const sourceFieldNameMap = dh.getFieldNameMap(sourceFields);
@@ -456,7 +451,7 @@ export default {
  inputRow,
  sourceFieldNameMap
  );
- } else if (headerName === '*source_type') {
+ } else if (headerName === 'source_type') {
  const hostScientificName =
  inputRow[sourceFieldNameMap['host_scientific_name']];
  const foodProduct = inputRow[sourceFieldNameMap['food_product']];