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[FIX] Use repetition time from BIDS metadata instead of nifti header #303

[FIX] Use repetition time from BIDS metadata instead of nifti header

[FIX] Use repetition time from BIDS metadata instead of nifti header #303

Workflow file for this run

---
name: System tests
on:
push:
branches: [main]
pull_request:
branches: ['*']
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
# Force to use color
env:
FORCE_COLOR: true
jobs:
system_test:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.11']
steps:
- name: Clone repo
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt-get update -y
sudo apt-get install -y git-annex
python -m pip install --upgrade pip setuptools
pip install datalad
- name: Install bidsmreye
run: |
pip install .
- name: Datalad WTF
run: |
datalad wtf
- name: Run demo
run: make demo
- name: Re run demo (should be faster)
run: |
make prepare
make generalize