Skip to content

Issues: cucapra/pollen

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

19 Open 33 Closed
19 Open 33 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Tracker: FlatGFA benchmarks
#185 opened May 18, 2024 by sampsyo
2 of 15 tasks
Tracker: FlatGFA data structure optimization
#184 opened May 18, 2024 by sampsyo
3 of 9 tasks
Tracker: FlatGFA Python bindings
#179 opened May 14, 2024 by sampsyo
8 of 10 tasks
1
Divesting from odgi's Python bindings: documentation
#148 opened Nov 6, 2023 by anshumanmohan
Divesting from odgi's Python bindings: testing
#147 opened Nov 6, 2023 by anshumanmohan
Beyond .og: a zoo of data representations feature New feature, or a meaningful extension to an existing feature juicy More interesting than a chore, yet well-defined enough to be completed without getting too lost
#146 opened Nov 4, 2023 by anshumanmohan
@anshumanmohan
1
Currently unparseable parts of Pollen programs
#135 opened Aug 1, 2023 by priyasrikumar
8 tasks
3
Uniform test strategy: drop symlinks, use a long turnt file
#130 opened Jul 20, 2023 by anshumanmohan
Dangling file process.py? bug Something isn't working
#128 opened Jul 19, 2023 by anshumanmohan
@susan-garry
mygfa doesn't parse optional CIGAR strings triage required Ideas that need further discussion, whether asynchronous or synchronous, before we can take action
#124 opened Jul 17, 2023 by susan-garry
3
calyx_depth.py: divest from odgi's Python bindings feature New feature, or a meaningful extension to an existing feature
#107 opened Jun 19, 2023 by anshumanmohan
1 of 3 tasks
1
calyx_depth.py: lighten notation by using Calyx eDSL feature New feature, or a meaningful extension to an existing feature juicy More interesting than a chore, yet well-defined enough to be completed without getting too lost
#106 opened Jun 19, 2023 by anshumanmohan
calyx_depth.py: use the eDSL, stop using odgi's Python bindings feature New feature, or a meaningful extension to an existing feature
#105 opened Jun 19, 2023 by anshumanmohan
2 tasks
4
pollen_data_gen: go all the way to binary? feature New feature, or a meaningful extension to an existing feature
#104 opened Jun 10, 2023 by anshumanmohan
@anshumanmohan
slow-odgi: extract feature New feature, or a meaningful extension to an existing feature juicy More interesting than a chore, yet well-defined enough to be completed without getting too lost
#100 opened May 31, 2023 by anshumanmohan slow odgi 0.2
@anshumanmohan
Proofs about our commands feature New feature, or a meaningful extension to an existing feature
#85 opened May 8, 2023 by anshumanmohan
@anshumanmohan
1
odgi source confusion
#74 opened Apr 27, 2023 by anshumanmohan slow odgi 0.2
@anshumanmohan
2
slow-odgi: better benchmarking feature New feature, or a meaningful extension to an existing feature
#72 opened Apr 26, 2023 by anshumanmohan
1 of 4 tasks
slow odgi 0.2
@anshumanmohan
slow-odgi 0.n feature New feature, or a meaningful extension to an existing feature
#46 opened Apr 12, 2023 by anshumanmohan
5 of 11 tasks
@anshumanmohan
ProTip! no:milestone will show everything without a milestone.