C:\Windows\System32\drivers\etc\hosts
git config --global http.sslBackend "openssl"
git config --global http.sslCAInfo C:/Program Files/R/R-3.6.0/library/openssl/cacert.pem
git config --global http.sslCAInfo /mnt/ilustre/centos7users/dna/.env/lib/R/library/openssl/cacert.pem
install packages from the github library("usethis") git_sitrep() # git situation report usethis::create_github_token()# open the website and make new token usethis::edit_r_environ() #可以改变temp的目录，重启就可以更新path #get tempdir ： tempdir()
#EDIT：GITHUB_TOKEN="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" #• Modify '/mnt/ilustre/users/meng.luo/.Renviron' #• Restart R for changes to take effect
git config --global user.email "czheluo@gmail.com"
git config --global user.name "czheluo" conda install R need change the gun++11 to c++11, and need change install pkg-config (conda install ) conda install -c conda-forge pkg-config conda install -c anaconda hdf5
$ ./configure --prefix=/mnt/ilustre/users/meng.luo/project/RNA/ST/R4.3.3 $ make $ make install
$ conda config --add channels conda-forge
$ conda config --set channel_priority strict
$ conda search r-base
$ conda create -n R4.2.2
$ conda activate R4.2.2
$ conda install -c conda-forge -r r-base=4.2.2
$conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free
$conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
$conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
$conda config --set show_channel_urls yes
reference
Schulze S, Henkel SG, Driesch D, Guthke R, Linde J. Computational prediction of molecular pathogen-host interactions based on dual transcriptome data. Front Microbiol. 2015;6:65. Published 2015 Feb 6. doi:10.3389/fmicb.2015.00065
Read sequences along the indicated segments of the AB genome. Read counts (in brackets), read length and genomic position are indicated.
