Fix: Install required Python and R packages for Quarto build #7

	name: Quarto Publish

	on:
	push:
	branches:
	- main # Trigger on push to main branch
	workflow_dispatch: # Allows manual triggering

	jobs:
	build-deploy:
	runs-on: ubuntu-latest

	steps:
	# Step 1: Checkout the repository
	- uses: actions/checkout@v3

	# Step 2: Set up Python
	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.10'

	# Step 3: Install Python dependencies
	- name: Install Python dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install jupyter nbformat psycopg2 sqlalchemy pandas numpy matplotlib

	# Step 4: Set up R
	- name: Set up R
	uses: r-lib/actions/setup-r@v2
	with:
	r-version: '4.4.1'

	# Step 5: Install R packages
	run: \|
	Rscript -e 'install.packages(c("rmarkdown", "knitr"), repos="https://cloud.r-project.org/")'

	# Step 6: Set up Quarto
	- name: Set up Quarto
	uses: quarto-dev/quarto-actions/setup@v2

	# Step 7: Render the Quarto site
	- name: Render Quarto site
	run: quarto render

	# Step 8: Deploy to GitHub Pages
	- name: Deploy to GitHub Pages
	uses: peaceiris/actions-gh-pages@v3
	with:
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: ./docs
	publish_branch: gh-pages
	force_orphan: true

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