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DAOS-16501 build: Add libsanitize #15105

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1 change: 1 addition & 0 deletions ci/unit/required_packages.sh
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@ pkgs="argobots \
fuse3-libs \
gotestsum \
hwloc-devel \
libasn \
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Typo of "libasan"?

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Arghhhh; going to fix this

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  • Fix invalid package name

libipmctl-devel \
libisa-l-devel \
libfabric-devel \
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10 changes: 9 additions & 1 deletion site_scons/components/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -277,7 +277,15 @@ def define_components(reqs):
abt_build = ['./configure',
'--prefix=$ARGOBOTS_PREFIX',
'CC=gcc',
'--enable-stack-unwind']
'--enable-stack-unwind=yes']
try:
if reqs.get_env('SANITIZERS') != "":
# NOTE the address sanitizer library add some extra info on the stack and thus ULTs
# need a bigger stack
print("Increase argobots default stack size from 16384 to 32768")
abt_build += ['--enable-default-stacksize=32768']
except KeyError:
pass

if reqs.target_type == 'debug':
abt_build.append('--enable-debug=most')
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1 change: 1 addition & 0 deletions site_scons/prereq_tools/base.py
Original file line number Diff line number Diff line change
Expand Up @@ -456,6 +456,7 @@ def __init__(self, env, opts):
['gcc', 'covc', 'clang', 'icc'], ignorecase=2))
opts.Add(EnumVariable('WARNING_LEVEL', "Set default warning level", 'error',
['warning', 'warn', 'error'], ignorecase=2))
opts.Add(('SANITIZERS', 'Instrument C code with google sanitizers', None))

opts.Update(self.__env)

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42 changes: 41 additions & 1 deletion site_scons/site_tools/compiler_setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,7 @@

from SCons.Script import Configure, Exit, GetOption

FRAME_SIZE_MAX = 4096
DESIRED_FLAGS = ['-fstack-usage',
'-Wno-sign-compare',
'-Wno-unused-parameter',
Expand All @@ -13,7 +14,7 @@
'-Wno-unused-command-line-argument',
'-Wmismatched-dealloc',
'-Wfree-nonheap-object',
'-Wframe-larger-than=4096']
f"-Wframe-larger-than={FRAME_SIZE_MAX}"]

# Compiler flags to prevent optimizing out security checks
DESIRED_FLAGS.extend(['-fno-strict-overflow', '-fno-delete-null-pointer-checks', '-fwrapv'])
Expand Down Expand Up @@ -54,6 +55,25 @@ def _base_setup(env):

env.AppendIfSupported(CCFLAGS=DESIRED_FLAGS)

if 'SANITIZERS' in env and env['SANITIZERS'] != "":
for flag in [f"-Wframe-larger-than={FRAME_SIZE_MAX}", '-fomit-frame-pointer']:
if flag in env["CCFLAGS"]:
env["CCFLAGS"].remove(flag)
cc_flags = [f"-Wframe-larger-than={max(8192, FRAME_SIZE_MAX)}",
'-fno-omit-frame-pointer',
'-fno-common']

asan_flags = []
for sanitizer in env['SANITIZERS'].split(','):
asan_flags.append(f"-fsanitize={sanitizer}")

env.AppendIfSupported(CCFLAGS=cc_flags + asan_flags)

for flag in asan_flags:
if flag in env["CCFLAGS"]:
env.AppendUnique(LINKFLAGS=flag)
print(f"Enabling {flag.split('=')[1]} sanitizer for C code")

if '-Wmismatched-dealloc' in env['CCFLAGS']:
env.AppendUnique(CPPDEFINES={'HAVE_DEALLOC': '1'})

Expand Down Expand Up @@ -183,10 +203,30 @@ def _set_fortify_level(env):
Exit(1)


def _check_func(env, func_name):
"""Check if a function is usable"""
denv = env.Clone()
# NOTE Remove sanitizers to not scramble the test output
if 'SANITIZERS' in denv and denv['SANITIZERS'] != "":
for sanitizer in denv['SANITIZERS'].split(','):
flag = f"-fsanitize={sanitizer}"
if flag not in denv["CCFLAGS"]:
continue
denv["CCFLAGS"].remove(flag)
denv["LINKFLAGS"].remove(flag)

config = Configure(denv)
res = config.CheckFunc(func_name)
config.Finish()

return res


def generate(env):
"""Add daos specific method to environment"""
env.AddMethod(_base_setup, 'compiler_setup')
env.AddMethod(_append_if_supported, "AppendIfSupported")
env.AddMethod(_check_func, "CheckFunc")


def exists(_env):
Expand Down
4 changes: 1 addition & 3 deletions src/SConscript
Original file line number Diff line number Diff line change
Expand Up @@ -76,12 +76,10 @@ def scons():
base_env_mpi.AppendUnique(CPPPATH=[Dir('include')])

if not env.GetOption('clean') and not env.GetOption('help'):
conf = env.Clone().Configure()
# Detect if we have explicit_bzero
if not conf.CheckFunc('explicit_bzero'):
if not env.CheckFunc('explicit_bzero'):
env.Append(CCFLAGS=['-DNEED_EXPLICIT_BZERO'])
base_env.Append(CCFLAGS=['-DNEED_EXPLICIT_BZERO'])
conf.Finish()

for header in HEADERS:
env.Install(os.path.join('$PREFIX', 'include'), os.path.join('include', header))
Expand Down
2 changes: 1 addition & 1 deletion src/client/dfs/SConscript
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ def configure_lustre(denv):
_print("No installed Lustre version detected")
else:
_print("Installed Lustre version detected")
if not conf.CheckFunc('llapi_unlink_foreign'):
if not denv.CheckFunc('llapi_unlink_foreign'):
_print("Lustre version is not compatible")
else:
_print("Lustre version is compatible")
Expand Down
2 changes: 2 additions & 0 deletions src/control/SConscript
Original file line number Diff line number Diff line change
Expand Up @@ -36,6 +36,8 @@ def get_build_flags(benv):
"""Return string of build flags"""
if is_release_build(benv):
return '-buildmode=pie'
if 'SANITIZERS' in benv and benv['SANITIZERS'] != "":
return '-asan'
# enable race detector for non-release builds
return '-race'

Expand Down
17 changes: 10 additions & 7 deletions utils/ansible/ftest/templates/daos-make.sh.j2
Original file line number Diff line number Diff line change
Expand Up @@ -115,7 +115,7 @@ function check_cmds
function usage
{
cat <<- EOF
usage: daos-make.sh [OPTIONS]
usage: daos-make.sh [OPTIONS] [-- ARGS]

Build and install DAOS for running avocado functional tests

Expand Down Expand Up @@ -221,17 +221,20 @@ run $PIP_EXE install --upgrade pip
run $PIP_EXE install -r "$DAOS_SOURCE_DIR/requirements.txt"

SCONS_OPTS="--directory="$DAOS_SOURCE_DIR" --jobs=$JOBS_NB"
if "$FORCE_INSTALL" ; then
SCONS_OPTS+=" --config=force"
fi

if "$DAOS_BUILD_DEPS" ; then
info "Building DAOS dependencies from source tree $DAOS_SOURCE_DIR"
if ! run "$SCONS_EXE" BUILD_TYPE="$DAOS_BUILD_TYPE" PREFIX="$DAOS_INSTALL_DIR" $SCONS_OPTS --build-deps=only ; then
if ! run "$SCONS_EXE" BUILD_TYPE="$DAOS_BUILD_TYPE" PREFIX="$DAOS_INSTALL_DIR" "${args[@]}" $SCONS_OPTS --build-deps=only ; then
fatal "DAOS dependencies could not be properly build"
fi
fi

info "Building DAOS from source tree $DAOS_SOURCE_DIR"
# NOTE Dependencies will not be build as 'no' is default value of the --build-deps option
if ! run env MPI_PKG=any "$SCONS_EXE" BUILD_TYPE="$DAOS_BUILD_TYPE" PREFIX="$DAOS_INSTALL_DIR" $SCONS_OPTS ; then
if ! run env MPI_PKG=any "$SCONS_EXE" BUILD_TYPE="$DAOS_BUILD_TYPE" PREFIX="$DAOS_INSTALL_DIR" "${args[@]}" $SCONS_OPTS ; then
fatal "DAOS could not be properly build"
fi

Expand Down Expand Up @@ -275,10 +278,10 @@ run $CLUSH_EXE $CLUSH_OPTS -l root -w $CLIENTS_LIST chmod 755 /usr/bin/dfuse
info "Updating dynamic linker configuration"
{% if "daos_clients" in groups and groups["daos_clients"] | length > 0 %}
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST rm -f /etc/ld.so.cache
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST ldconfig
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST ldconfig $DAOS_INSTALL_DIR/lib64 $DAOS_INSTALL_DIR/lib64/daos_srv
{% else %}
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST rm -f /etc/ld.so.cache
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST ldconfig
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST ldconfig $DAOS_INSTALL_DIR/lib64 $DAOS_INSTALL_DIR/lib64/daos_srv
{% endif %}

if [[ ${MPICH_PATH:+x} ]] ; then
Expand Down Expand Up @@ -627,8 +630,8 @@ fi
info "Updating dynamic linker configuration"
{% if "daos_clients" in groups and groups["daos_clients"] | length > 0 %}
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST rm -f /etc/ld.so.cache
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST ldconfig
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST -w $CLIENTS_LIST ldconfig $DAOS_INSTALL_DIR/lib64 $DAOS_INSTALL_DIR/lib64/daos_srv
{% else %}
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST rm -f /etc/ld.so.cache
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST ldconfig
run $CLUSH_EXE $CLUSH_OPTS -l root -w $SERVERS_LIST ldconfig $DAOS_INSTALL_DIR/lib64 $DAOS_INSTALL_DIR/lib64/daos_srv
{% endif %}
3 changes: 3 additions & 0 deletions utils/ansible/ftest/vars/Rocky8.yml
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,7 @@ daos_base_deps:
- glibc
- jq
- lbzip2
- libasan
- numactl
- numactl-libs
- numatop
Expand All @@ -33,13 +34,15 @@ daos_dev_deps:
- gcc-c++
- gcc-gfortran
- golang
- hdf5-devel
- libaec-devel
- libattr-devel
- libcmocka-devel
- libevent-devel
- libyaml-devel
- openssl-devel
- pciutils-devel
- protobuf-c-devel
- python3.11
- python3.11-devel
- python3-clustershell
Expand Down
3 changes: 2 additions & 1 deletion utils/build.config
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
component=daos

[commit_versions]
argobots=v1.1
argobots=v1.2
fuse=fuse-3.16.2
pmdk=2.0.0
isal=v2.30.0
Expand Down Expand Up @@ -30,3 +30,4 @@ spdk=https://github.com/spdk/spdk/commit/b0aba3fcd5aceceea530a702922153bc7566497
ofi=https://github.com/ofiwg/libfabric/commit/d827c6484cc5bf67dfbe395890e258860c3f0979.diff
fuse=https://github.com/libfuse/libfuse/commit/c9905341ea34ff9acbc11b3c53ba8bcea35eeed8.diff
mercury=https://raw.githubusercontent.com/daos-stack/mercury/481297621bafbbcac4cc6f8feab3f1b6f8b14b59/na_ucx_keyres_epchk.patch
argobots=https://github.com/pmodels/argobots/pull/397/commits/411e5b344642ebc82190fd8b125db512e5b449d1.diff,https://github.com/pmodels/argobots/commit/bb0c908abfac4bfe37852eee621930634183c6aa.diff
16 changes: 14 additions & 2 deletions utils/rpms/daos.spec
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@

Name: daos
Version: 2.7.100
Release: 5%{?relval}%{?dist}
Release: 7%{?relval}%{?dist}
Summary: DAOS Storage Engine

License: BSD-2-Clause-Patent
Expand All @@ -41,7 +41,7 @@ BuildRequires: hwloc-devel
BuildRequires: bullseye
%endif
%if (0%{?rhel} >= 8)
BuildRequires: argobots-devel >= 1.1
BuildRequires: argobots-devel >= 1.2
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If you want to try to use this here (i.e. before it's landed from it's currently open PR) you will need to add:

PR-repos: argobots@PR-20

to your commit messages in this PR. The above only works if the argobots result is "pass" i.e. green such as it is here:
image

If it's not a pass (i.e. red in Jenkins, maybe because testing failed due to some known test failure) but you still want to use it you will have to add the run number to the commit pragma such as:

PR-repos: argobots@PR-20:6

The benefit of not adding the :<run-number> if you can, is that you don't have to keep updating your commit message when you do additional argobots commits/runs.

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Thanks a lot for tip.
The error messages were a little bit cryptic for me.
Indeed, the packaging build was working, the unit test was failing and I was not able to find the reasons in the log files.
Could you tell me what in the error message(s) allowed to get to this conclusion ?

BuildRequires: json-c-devel
BuildRequires: boost-python3-devel
%else
Expand Down Expand Up @@ -121,6 +121,14 @@ BuildRequires: libuct-devel
BuildRequires: ucx-devel
%endif

# Needed for debugging tasks
%if (0%{?rhel} >= 8)
BuildRequires: libasan
%endif
%if (0%{?suse_version} > 0)
BuildRequires: libasan8
%endif

Requires: openssl
# This should only be temporary until we can get a stable upstream release
# of mercury, at which time the autoprov shared library version should
Expand Down Expand Up @@ -592,6 +600,10 @@ getent passwd daos_agent >/dev/null || useradd -s /sbin/nologin -r -g daos_agent
# No files in a shim package

%changelog
* Tue Sep 10 2024 Cedric Koch-Hofer <cedric.koch-hofer@intel.com> 2.7.100-6
- Update argobots to 1.2
- Add support of the libasan

* Thu Aug 15 2024 Michael MacDonald <mjmac@google.com> 2.7.100-5
- Add libdaos_self_test.so to client RPM

Expand Down
1 change: 1 addition & 0 deletions utils/scripts/install-el8.sh
Original file line number Diff line number Diff line change
Expand Up @@ -36,6 +36,7 @@ dnf --nodocs install \
java-1.8.0-openjdk \
json-c-devel \
libaio-devel \
libasan \
libcmocka-devel \
libevent-devel \
libiscsi-devel \
Expand Down
1 change: 1 addition & 0 deletions utils/scripts/install-el9.sh
Original file line number Diff line number Diff line change
Expand Up @@ -35,6 +35,7 @@ dnf --nodocs install \
java-1.8.0-openjdk \
json-c-devel \
libaio-devel \
libasan \
libcmocka-devel \
libevent-devel \
libipmctl-devel \
Expand Down
1 change: 1 addition & 0 deletions utils/scripts/install-leap15.sh
Original file line number Diff line number Diff line change
Expand Up @@ -31,6 +31,7 @@ dnf --nodocs install \
hwloc-devel \
java-1_8_0-openjdk-devel \
libaio-devel \
libasan8 \
libcmocka-devel \
libcapstone-devel \
libevent-devel \
Expand Down
1 change: 1 addition & 0 deletions utils/scripts/install-ubuntu.sh
Original file line number Diff line number Diff line change
Expand Up @@ -25,6 +25,7 @@ apt-get install \
golang-go \
kmod \
libaio-dev \
libasan8 \
libboost-dev \
libcapstone-dev \
libcmocka-dev \
Expand Down
6 changes: 5 additions & 1 deletion utils/sl/fake_scons/SCons/Script/__init__.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
"""Fake scons environment shutting up pylint on SCons files"""
# Copyright 2016-2023 Intel Corporation
# Copyright 2016-2024 Intel Corporation
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
Expand Down Expand Up @@ -338,6 +338,10 @@ def require(self, env, *kw, headers_only=False):
"""Fake require"""
return

def CheckFunc(self, *_args, **_kw):
"""Fake CheckFunc"""
return True


class Variables():
"""Fake variables"""
Expand Down
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