-
Notifications
You must be signed in to change notification settings - Fork 60
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
feat (network): workflows jupyter/orange
- Loading branch information
Showing
18 changed files
with
2,150 additions
and
285 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -20,3 +20,9 @@ Gemfile.lock | |
| .Trashes | ||
| ehthumbs.db | ||
| Thumbs.db | ||
|
|
||
| # LibreOffice | ||
| .~lock.*# | ||
|
|
||
| # Jupyter Notebook | ||
| .ipynb_checkpoints | ||
387 changes: 387 additions & 0 deletions
387
...s/cml-chronic-myeloid-leukemia/article-imatinib/11-jupyter/490-nodes-up-1-neo4j-edges.csv
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,387 @@ | ||
| p1.name,p2.name | ||
| ANXA2,ANXA5 | ||
| BLM,BRCA1 | ||
| BLM,BRIP1 | ||
| BRCA1,BRIP1 | ||
| CACNA1D,CACNB2 | ||
| BUB3,CCT5 | ||
| CDC45,CDC6 | ||
| CDC45,CDC7 | ||
| CDC6,CDC7 | ||
| CDH2,CDH9 | ||
| BRCA1,CDKN1A | ||
| CDC45,CDKN1A | ||
| CDC6,CDKN1A | ||
| CDC7,CDKN1A | ||
| BCL6,CDKN1B | ||
| CDKN1A,CDKN1B | ||
| BRCA1,CENPJ | ||
| BRCA1,CENPU | ||
| CENPK,CENPU | ||
| BRCA1,CHEK1 | ||
| BRIP1,CHEK1 | ||
| APOD,CLU | ||
| APOO,CLU | ||
| BCL2L1,CLU | ||
| AREG,CTSC | ||
| CCL5,CXCL2 | ||
| CCL5,CXCR4 | ||
| CXCL2,CXCR4 | ||
| CCT5,DCAF12 | ||
| CDKN1B,DCAF12 | ||
| BRCA1,DCLRE1C | ||
| ARG2,DHCR24 | ||
| DHCR24,DHCR7 | ||
| CABLES1,DLK1 | ||
| BLM,DNA2 | ||
| BRCA1,DNA2 | ||
| BRIP1,DNA2 | ||
| ANPEP,DPP4 | ||
| CXCL2,DPP4 | ||
| CXCR4,DPP4 | ||
| CDKN1A,DTL | ||
| CDKN1B,DTL | ||
| CHEK1,DTL | ||
| DCAF12,DTL | ||
| DCUN1D5,DTL | ||
| BRCA1,EGR3 | ||
| CD36,EMP1 | ||
| BRCA1,FANCI | ||
| BRIP1,FANCI | ||
| DCLRE1C,FANCI | ||
| CD36,FCER1G | ||
| FCER1G,FCGR2A | ||
| CDH2,FGF9 | ||
| CEBPB,FOSL1 | ||
| ANK3,GABARAPL1 | ||
| CDC45,GINS1 | ||
| CDC45,GINS2 | ||
| EIPR1,GINS2 | ||
| GINS1,GINS2 | ||
| CDKN1A,GMNN | ||
| BRCA1,H2AC14 | ||
| H2AC14,H3C12 | ||
| ELOVL6,HACD3 | ||
| FADS1,HACD3 | ||
| CENPJ,HAUS6 | ||
| GSTM3,HPGDS | ||
| CCT5,HSPE1 | ||
| AREG,ICAM1 | ||
| CD36,ICAM1 | ||
| CXCR4,ICAM1 | ||
| EMP1,ICAM1 | ||
| ARHGEF12,IGF1R | ||
| CXCR4,IGF1R | ||
| CXCR4,IL1B | ||
| IL1B,IL1R1 | ||
| IL1B,IL1RAP | ||
| IL1R1,IL1RAP | ||
| IL1B,IL1RL1 | ||
| IL1R1,IL1RL1 | ||
| IL1RAP,IL1RL1 | ||
| ICAM1,IL2RA | ||
| IL1R1,IL2RA | ||
| ICAM1,ITGAL | ||
| CD36,ITGB3 | ||
| IGF1R,ITGB3 | ||
| ITGAL,ITGB3 | ||
| GLI2,KDM6B | ||
| CDH2,KLRG1 | ||
| BRCA1,KNL1 | ||
| BUB3,KNL1 | ||
| CENPK,KNL1 | ||
| CENPU,KNL1 | ||
| DSN1,KNL1 | ||
| ANK3,MAPRE3 | ||
| BCL2L1,MCL1 | ||
| BRCA1,MCM10 | ||
| CDC45,MCM10 | ||
| CDC6,MCM10 | ||
| CDC7,MCM10 | ||
| CDKN1A,MCM10 | ||
| DNA2,MCM10 | ||
| GINS1,MCM10 | ||
| CDC45,MCM2 | ||
| CDC6,MCM2 | ||
| CDC7,MCM2 | ||
| GINS1,MCM2 | ||
| GINS2,MCM2 | ||
| H3C12,MCM2 | ||
| MCM10,MCM2 | ||
| CDC45,MCM3 | ||
| CDC6,MCM3 | ||
| CDC7,MCM3 | ||
| CHEK1,MCM3 | ||
| GINS1,MCM3 | ||
| GINS2,MCM3 | ||
| GMNN,MCM3 | ||
| H3C12,MCM3 | ||
| MCM10,MCM3 | ||
| MCM2,MCM3 | ||
| CDC45,MCM4 | ||
| CDC6,MCM4 | ||
| CDC7,MCM4 | ||
| GINS1,MCM4 | ||
| GINS2,MCM4 | ||
| H3C12,MCM4 | ||
| MCM10,MCM4 | ||
| MCM2,MCM4 | ||
| MCM3,MCM4 | ||
| CDC45,MCM5 | ||
| CDC6,MCM5 | ||
| CDC7,MCM5 | ||
| GINS1,MCM5 | ||
| GINS2,MCM5 | ||
| MCM10,MCM5 | ||
| MCM2,MCM5 | ||
| MCM3,MCM5 | ||
| MCM4,MCM5 | ||
| CDC45,MCM6 | ||
| CDC6,MCM6 | ||
| CDC7,MCM6 | ||
| GINS1,MCM6 | ||
| GINS2,MCM6 | ||
| GMNN,MCM6 | ||
| H3C12,MCM6 | ||
| MCM10,MCM6 | ||
| MCM2,MCM6 | ||
| MCM3,MCM6 | ||
| MCM4,MCM6 | ||
| MCM5,MCM6 | ||
| MFAP3,MFAP5 | ||
| MFAP4,MFAP5 | ||
| BRCA1,MID2 | ||
| CENPU,MLF1 | ||
| DSN1,MLF1 | ||
| KNL1,MLF1 | ||
| LIN7A,MPDZ | ||
| ERAL1,MTERF3 | ||
| CDH2,MTHFD1 | ||
| DPYSL3,NCKAP1 | ||
| COX7B,NDUFA2 | ||
| NDUFA2,NDUFAF1 | ||
| BHLHE41,NFIL3 | ||
| HLF,NFIL3 | ||
| CDH2,NLGN1 | ||
| EPB41L3,NLGN1 | ||
| LGALS1,NLGN1 | ||
| MAGI2,NLGN1 | ||
| BRCA1,NMI | ||
| FKBP4,NR3C2 | ||
| MIDN,NR4A1 | ||
| NUP210,NUP43 | ||
| CDC45,ORC1 | ||
| CDC6,ORC1 | ||
| CDC7,ORC1 | ||
| H2AC14,ORC1 | ||
| H3C12,ORC1 | ||
| MCM10,ORC1 | ||
| MCM2,ORC1 | ||
| MCM3,ORC1 | ||
| MCM4,ORC1 | ||
| MCM5,ORC1 | ||
| MCM6,ORC1 | ||
| LMNA,PAPSS1 | ||
| BRCA1,PCLAF | ||
| CDKN1A,PCLAF | ||
| ANXA2,PCNA | ||
| CDC45,PCNA | ||
| CDKN1A,PCNA | ||
| DNA2,PCNA | ||
| DTL,PCNA | ||
| ESCO2,PCNA | ||
| IGF1R,PCNA | ||
| MCM3,PCNA | ||
| MCM4,PCNA | ||
| PCLAF,PCNA | ||
| HAVCR2,PDCD1LG2 | ||
| ICOS,PDCD1LG2 | ||
| DLAT,PDK1 | ||
| DPYSL3,PDLIM1 | ||
| NCKAP1,PDLIM1 | ||
| IDH1,PEX12 | ||
| GP1BA,PGM5 | ||
| ANXA2,PLAU | ||
| BCL2L1,PLAU | ||
| CFH,PLAU | ||
| CENPJ,PLK4 | ||
| HAUS6,PLK4 | ||
| CDC45,POLE2 | ||
| DTL,POLE2 | ||
| GINS1,POLE2 | ||
| GINS2,POLE2 | ||
| MCM2,POLE2 | ||
| MCM3,POLE2 | ||
| MCM4,POLE2 | ||
| MCM5,POLE2 | ||
| MCM6,POLE2 | ||
| PCNA,POLE2 | ||
| BRCA1,POLR2H | ||
| GTF2A2,POLR2H | ||
| GTF3C6,POLR2H | ||
| H2AC14,POLR2H | ||
| H3C12,POLR2H | ||
| INTS7,POLR2H | ||
| EPB41L3,PRMT3 | ||
| CNTN1,PRNP | ||
| PSMA4,PSMA6 | ||
| PSMA4,PSMB6 | ||
| PSMA6,PSMB6 | ||
| PTGER2,PTGER4 | ||
| CCL5,PTGS2 | ||
| PTGS1,PTGS2 | ||
| AREG,PTK2 | ||
| IGF1R,PTK2 | ||
| ITGB3,PTK2 | ||
| LPXN,PTK2 | ||
| IL1RAP,PTPRD | ||
| BLM,RAD17 | ||
| BRCA1,RAD17 | ||
| BRIP1,RAD17 | ||
| DNA2,RAD17 | ||
| PCNA,RAD17 | ||
| BLM,RAD51 | ||
| BRCA1,RAD51 | ||
| BRIP1,RAD51 | ||
| CHEK1,RAD51 | ||
| DNA2,RAD51 | ||
| FANCI,RAD51 | ||
| MND1,RAD51 | ||
| PCNA,RAD51 | ||
| BLM,RAD51AP1 | ||
| BRCA1,RAD51AP1 | ||
| BRIP1,RAD51AP1 | ||
| CHEK1,RAD51AP1 | ||
| DNA2,RAD51AP1 | ||
| RAD51,RAD51AP1 | ||
| BLM,RAD51C | ||
| BRCA1,RAD51C | ||
| BRIP1,RAD51C | ||
| DNA2,RAD51C | ||
| FANCI,RAD51C | ||
| RAD51,RAD51C | ||
| RAD51AP1,RAD51C | ||
| IQGAP1,RALA | ||
| RALA,RALB | ||
| ICAM1,RASGEF1B | ||
| BLM,RFC4 | ||
| BRCA1,RFC4 | ||
| BRIP1,RFC4 | ||
| DNA2,RFC4 | ||
| DTL,RFC4 | ||
| PCNA,RFC4 | ||
| POLE2,RFC4 | ||
| RAD17,RFC4 | ||
| BLM,RMI1 | ||
| BRCA1,RMI1 | ||
| BRIP1,RMI1 | ||
| DNA2,RMI1 | ||
| RAD17,RMI1 | ||
| RAD51,RMI1 | ||
| RAD51AP1,RMI1 | ||
| RAD51C,RMI1 | ||
| RFC4,RMI1 | ||
| ANXA2,S100A10 | ||
| ANXA5,S100A10 | ||
| ANXA2,S100A11 | ||
| ELOVL6,SCD | ||
| HACD3,SCD | ||
| ANK3,SCN9A | ||
| GP1BA,SELP | ||
| GP1BA,SELPLG | ||
| ICAM1,SELPLG | ||
| SELP,SELPLG | ||
| ANXA2,SERPINE1 | ||
| CCL5,SERPINE1 | ||
| PLAU,SERPINE1 | ||
| BRCA1,SKP2 | ||
| CDKN1A,SKP2 | ||
| CDKN1B,SKP2 | ||
| ORC1,SKP2 | ||
| PEX12,SLC27A2 | ||
| BRCA1,SLF1 | ||
| CDC45,SLF1 | ||
| H2AC14,SMC2 | ||
| H3C12,SMC2 | ||
| ARHGEF40,SMC3 | ||
| BRCA1,SMC3 | ||
| CDC45,SMC3 | ||
| ESCO2,SMC3 | ||
| SGO1,SMC3 | ||
| BRCA1,SMC6 | ||
| SLF1,SMC6 | ||
| DNM3,SNX9 | ||
| CD33,SOCS3 | ||
| IRF1,SOCS3 | ||
| PIK3R6,SOCS3 | ||
| PTK2,SOCS3 | ||
| PSMA4,SORT1 | ||
| AREG,SOS1 | ||
| BTK,SOS1 | ||
| FGF9,SOS1 | ||
| FLT3,SOS1 | ||
| IL2RA,SOS1 | ||
| ITGB3,SOS1 | ||
| PTK2,SOS1 | ||
| ANXA5,SPARC | ||
| CFH,SPP1 | ||
| ITGB3,SPP1 | ||
| SPARC,SPP1 | ||
| CFH,STX2 | ||
| BTK,TEC | ||
| SOS1,TEC | ||
| CDC45,TICRR | ||
| MCM10,TICRR | ||
| CD36,TIMP1 | ||
| DPP4,TIMP1 | ||
| ICAM1,TIMP1 | ||
| MFAP4,TIMP1 | ||
| MINDY3,TIMP1 | ||
| ICOS,TNFSF13B | ||
| IQGAP1,TPM4 | ||
| IL1B,TRIM16 | ||
| ADAM19,TSC22D2 | ||
| TSC22D2,TSC22D3 | ||
| BRCA1,TTC28 | ||
| BUB3,TTK | ||
| DHFR,TYMS | ||
| SHMT2,TYMS | ||
| PSMA4,UCHL5 | ||
| PSMA6,UCHL5 | ||
| PSMB6,UCHL5 | ||
| SMAD7,UCHL5 | ||
| BRCA1,UHRF1 | ||
| H2AC14,UHRF1 | ||
| H3C12,UHRF1 | ||
| PCLAF,UHRF1 | ||
| POLE2,UHRF1 | ||
| CHMP1B,VPS25 | ||
| GABARAPL1,WDFY3 | ||
| CDC45,WDHD1 | ||
| DNA2,WDHD1 | ||
| GINS1,WDHD1 | ||
| GINS2,WDHD1 | ||
| MCM10,WDHD1 | ||
| MCM2,WDHD1 | ||
| MCM3,WDHD1 | ||
| MCM4,WDHD1 | ||
| MCM5,WDHD1 | ||
| MCM6,WDHD1 | ||
| POLE2,WDHD1 | ||
| TTC28,WDHD1 | ||
| CCT5,WDR76 | ||
| HELLS,WDR76 | ||
| LMNA,WDR76 | ||
| RRP12,WDR76 | ||
| CDKN1B,XPO1 | ||
| RANBP1,XPO1 | ||
| SMAD7,XPO1 | ||
| SNUPN,XPO1 | ||
| BLM,XRCC2 | ||
| BRCA1,XRCC2 | ||
| BRIP1,XRCC2 | ||
| DNA2,XRCC2 | ||
| RAD51,XRCC2 | ||
| RAD51AP1,XRCC2 | ||
| RAD51C,XRCC2 | ||
| RMI1,XRCC2 |
Oops, something went wrong.