Merge pull request #104 from dbmi-bgm/drr_ingest_vcfs_fix

VCF Ingestion Fix
dbmi-bgm · Aug 4, 2023 · b59760e · b59760e
2 parents c93a808 + 2fc789d
commit b59760e
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 2 deletions.
diff --git a/CHANGELOG.rst b/CHANGELOG.rst
@@ -7,6 +7,10 @@ foursight-cgap
 Change Log
 ----------
 
+3.6.1
+=====
+* Add ingestion type to POST body for VCF ingestion action
+
 3.6.0
 =====
 * Changes (to foursight-core) to the access key check; making sure the action does not run every single day.

diff --git a/chalicelib_cgap/checks/wfr_checks.py b/chalicelib_cgap/checks/wfr_checks.py
@@ -680,7 +680,7 @@ def ingest_vcf_start(connection, **kwargs):
 
     my_auth = connection.ff_keys
     targets = check_result["files"]
-    post_body = {"uuids": targets}
+    post_body = {"uuids": targets, "ingestion_type": "vcf"}
     try:
         ff_utils.post_metadata(post_body, "/queue_ingestion", key=my_auth)
         action.output["queued for ingestion"] = targets

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "foursight-cgap"
-version = "3.6.0"
+version = "3.6.1"
 description = "Serverless Chalice Application for Monitoring"
 authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
 license = "MIT"
-Original file line number
+Diff line change
@@ Expand Up / @@ -7,6 +7,10 @@ foursight-cgap @@
     Change Log
     ----------
+.6.1
+    =====
+    * Add ingestion type to POST body for VCF ingestion action
 .6.0
     =====
     * Changes (to foursight-core) to the access key check; making sure the action does not run every single day.
@@ Expand Down @@