Upgrade Python 3.11

.github/workflows/main-CI.yml

@@ -18,15 +18,15 @@ jobs:
   # This workflow contains a single job called "build"
   build:
     # The type of runner that the job will run on
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:
       # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
       - uses: actions/checkout@v2
       - uses: actions/setup-python@v2
         with:
-          python-version: '3.7'
+          python-version: '3.11'
 
       - name: Install Deps
         run: pip install poetry

.github/workflows/main-publish.yml

@@ -26,7 +26,7 @@ jobs:
       - uses: actions/checkout@v2
       - uses: actions/setup-python@v2
         with:
-          python-version: 3.6
+          python-version: 3.11
       - name: Install Python dependencies for publish
         run: python -m pip install dcicutils
       - name: Publish

CHANGELOG.rst

@@ -7,65 +7,82 @@ foursight-cgap
 Change Log
 ----------
 
+4.0.0
+=====
+
+* Update to Python 3.11.
+
 3.6.1
 =====
+
 * Add ingestion type to POST body for VCF ingestion action
 
 3.6.0
 =====
+
 * Changes (to foursight-core) to the access key check; making sure the action does not run every single day.
 
 3.5.0
 =====
+
 * Changes in foursight-core (4.3.0) to fix access key check.
 
 3.4.5
 =====
+
 * Minor UI fixes for display of status text for checks/actions - in foursight-core.
 * Added UI warning for registered action functions with no associated check - in foursight-core.
 * Added UI display of Redis info on INFO page - in foursight-core.
 * Added a d default .chalice/config.json and removed this from .gitignore
 
 3.4.4
 =====
+
 * Update foursight-core 4.1.2.
   Fixes for check arguments not being converted (from string) to int/float/etc as
   appropriate in the React version only (was not calling query_params_to_literals).
 
 3.4.2
 =====
+
 * Version changes related to foursight-core changes for SSL certificate and Portal access key checking.
 * Using new dcicutils.scripts.publish_to_pypi for publish.
 
 3.3.3
 =====
+
 * Dependency updates to update magma + tibanna_ff to fix cost updates on MWFRs
 * Lifecycle policy tweaks
   * Remove default deletion of "long term" storage options
   * Remove archived files from search
 
 3.3.2
 =====
+
 * Update to foursight-core 3.3.2 (and dcicutils 6.8.0).
 
 3.3.0
 =====
+
 * Changes related editing user projects/institutions.
 * Removed the trigger_codebuild_run check (in foursight-core now).
 
 3.2.0
 =====
+
 * Changes related to support for running actions in Foursight React.
 
 3.1.0
 =====
+
 * Updated foursight-core version; changes there related to /accounts page.
   Not actually used currently here, only in foursight.
 * Moved lookup of check_setup.json (and accounts.json) to foursight-core,
   from foursight-cgap/chalicelib_cap/app_utils.py.
 
 2.2.0
 =====
+
 * Changes related to Foursight React.
   * Renamed chalicelib directory to chalicelib_cgap.
   * Renamed target package (pyproject.toml) from chalicelib to chalicelib_cgap.
@@ -82,23 +99,28 @@ Change Log
 
 2.1.4
 =====
+
 * Bring in mamga v1.1.0
 
 2.1.3
 =====
+
 * Lifecycle management: Only check files with ``project.lifecycle_management_active=true``. Furthermore, exclude files with status ``uploading`` and ``to be uploaded by workflow`` from the check.
 
 2.1.2
 =====
+
 * Assign correct action status when patch_file_lifecycle_status fails.
 
 2.1.1
 =====
+
 * Move lifecycle checks to separate group in UI.
 * Automatically run action for lifecycle checks.
 
 2.1.0
 =====
+
 * Spruced up Foursight UI a bit (virtually all in foursight-core but mentioning here).
   * New header/footer.
     * Different looks for Foursight-CGAP (blue header) and Foursight-Fourfront (green header).
@@ -111,9 +133,11 @@ Change Log
 
 2.0.1
 =====
+
 * Work to spruce up the UI a bit.
 
 2.0.0
 =====
+
 * Created this CHANGELOG.rst file.
 * New version of foursight-core (1.0.0) for work related to C4-826 (IDENTITY-izing Foursight).

chalicelib_cgap/scripts/local_check_execution.py

@@ -0,0 +1,12 @@
+from foursight_core.captured_output import captured_output
+from foursight_core.scripts.local_check_execution import local_check_execution
+with captured_output():
+    from chalicelib_cgap.app_utils import app_utils_obj as app_utils
+
+
+def main():
+    local_check_execution(app_utils)
+
+
+if __name__ == "__main__":
+    main()