Merge pull request #9 from demanasta/develop

Develop

.gitignore

@@ -1,32 +1,17 @@
-# Prerequisites
-*.d
+# gmt tmp files
+gmt.conf
+gmt.history
+*.log
 
-# Compiled Object files
-*.slo
-*.lo
-*.o
-*.obj
+# gmt outputs
+*.eps
+*.ps
+*.jpg
+*.png
+*.gif
 
-# Precompiled Headers
-*.gch
-*.pch
+#coulomb output files
+*.dat
+*.disp
+*.inp
 
-# Compiled Dynamic libraries
-*.so
-*.dylib
-*.dll
-
-# Fortran module files
-*.mod
-*.smod
-
-# Compiled Static libraries
-*.lai
-*.la
-*.a
-*.lib
-
-# Executables
-*.exe
-*.out
-*.app

CODE_OF_CONDUCT.md

@@ -0,0 +1,46 @@
+# Contributor Covenant Code of Conduct
+
+## Our Pledge
+
+In the interest of fostering an open and welcoming environment, we as contributors and maintainers pledge to making participation in our project and our community a harassment-free experience for everyone, regardless of age, body size, disability, ethnicity, gender identity and expression, level of experience, nationality, personal appearance, race, religion, or sexual identity and orientation.
+
+## Our Standards
+
+Examples of behavior that contributes to creating a positive environment include:
+
+* Using welcoming and inclusive language
+* Being respectful of differing viewpoints and experiences
+* Gracefully accepting constructive criticism
+* Focusing on what is best for the community
+* Showing empathy towards other community members
+
+Examples of unacceptable behavior by participants include:
+
+* The use of sexualized language or imagery and unwelcome sexual attention or advances
+* Trolling, insulting/derogatory comments, and personal or political attacks
+* Public or private harassment
+* Publishing others' private information, such as a physical or electronic address, without explicit permission
+* Other conduct which could reasonably be considered inappropriate in a professional setting
+
+## Our Responsibilities
+
+Project maintainers are responsible for clarifying the standards of acceptable behavior and are expected to take appropriate and fair corrective action in response to any instances of unacceptable behavior.
+
+Project maintainers have the right and responsibility to remove, edit, or reject comments, commits, code, wiki edits, issues, and other contributions that are not aligned to this Code of Conduct, or to ban temporarily or permanently any contributor for other behaviors that they deem inappropriate, threatening, offensive, or harmful.
+
+## Scope
+
+This Code of Conduct applies both within project spaces and in public spaces when an individual is representing the project or its community. Examples of representing a project or community include using an official project e-mail address, posting via an official social media account, or acting as an appointed representative at an online or offline event. Representation of a project may be further defined and clarified by project maintainers.
+
+## Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be reported by contacting the project team at dganastasiou@gmail.com. The project team will review and investigate all complaints, and will respond in a way that it deems appropriate to the circumstances. The project team is obligated to maintain confidentiality with regard to the reporter of an incident. Further details of specific enforcement policies may be posted separately.
+
+Project maintainers who do not follow or enforce the Code of Conduct in good faith may face temporary or permanent repercussions as determined by other members of the project's leadership.
+
+## Attribution
+
+This Code of Conduct is adapted from the [Contributor Covenant][homepage], version 1.4, available at [http://contributor-covenant.org/version/1/4][version]
+
+[homepage]: http://contributor-covenant.org
+[version]: http://contributor-covenant.org/version/1/4/

ChangeLog.md

@@ -0,0 +1,5 @@
+## Change log
+> Not created yet!
+
+### 2015/02/09 - Inception
+> Author(s): Demitris G. Anastasiou

Coulomb_anatolia.cpt

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+#	cpt file created by: makecpt -Crainbow -I -T-10/10/1 -Z -V
+#   COLOR_MODEL = RGB
+#   color legend "ANATOLIA"
+#
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+-1    231    253    255	0    255    255    255
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+5    254    245    145	6    253    243    123
+6    253    243    123	7    253    241    101
+7    253    241    101	8    253    239     79
+8    253    239     79	9    252    229     76
+9    252    229     76	10    252    218     74
+10    252    218     74	11    251    208     71
+11    251    208     71	12    250    197     69
+12    250    197     69	13    250    187     66
+13    250    187     66	14    249    177     64
+14    249    177     64	15    248    166     61
+15    248    166     61	16    248    156     59
+16    248    156     59	17    247    145     56
+17    247    145     56	18    246    135     54
+18    246    135     54	19    246    125     51
+19    246    125     51	20    245    114     49
+20    245    114     49	21    245    104     46
+21    245    104     46	22    244     94     44
+22    244     94     44	23    243     83     41
+23    243     83     41	24    243     73     39
+24    243     73     39	25    242     62     36
+25    242     62     36	26    241     52     34
+26    241     52     34	27    241     42     31
+27    241     42     31	28    240     31     29
+28    240     31     29	29    239     21     26
+29    239     21     26	30    239     10     24
+30    239     10     24	31    238      0     21
+B	 54     39    253
+F	 238      0     21
+N    255    255    255

LICENSE

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2017 DemAnasta
+Copyright (c) 2017 D. G. Anastasiou
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

README.md

@@ -1,2 +1,154 @@
-# coulomb2gmt
-bash scripts to plot coulomb results on gmt
+coulomb2gmt -- pre-released v1.0-beta*
+==================
+
+> Bash scripts to plot coulomb results on gmt
+
+
+[![License MIT](http://img.shields.io/badge/license-MIT-brightgreen.svg)](https://github.com/demanasta/coulomb2gmt/blob/master/LICENSE)
+[![](https://img.shields.io/github/release/demanasta/doulomb2gmt.svg)](https://github.com/coulomb2gmt/pres-templates/releases/latest)
+[![](https://img.shields.io/github/tag/demanasta/coulomb2gmt.svg)](https://github.com/demanasta/coulomb2gmt/tags)
+[![](https://img.shields.io/github/stars/demanasta/coulomb2gmt.svg)](https://github.com/demanasta/coulomb2gmt/stargazers)
+[![](https://img.shields.io/github/forks/demanasta/coulomb2gmt.svg)](https://github.com/demanasta/coulomb2gmt/network)
+[![](https://img.shields.io/github/issues/demanasta/coulomb2gmt.svg)](https://github.com/demanasta/coulomb2gmt/issues)
+
+## Author(s)
+*   Demitris G. Anastasiou	
+
+--------------------------------------------------------------------------------
+
+## Features
+
+* auto-configure map lat-long from input files (.inp)
+
+* Plot Stress changes (Coulomb, Normal, Shear)
+
+* Plot all strain components
+
+* Plot Fault geometry (Projection, Surface, Depth)
+
+* Plot gps displacement observed and modeled
+
+* Plot Fault and CMT databases
+
+* Add GMT timestamp logo and custom logo of your organization.
+
+*Adjust paper size to map and convert in different output formats (.jpg, .png, .eps, .pdf)
+
+
+## Requirements
+
+* __GMT__:  [The Generic Mappting Tools - GMT](http://gmt.soest.hawaii.edu/) version > 5.1.1 . Recommented installation from source code.
+	*  for _Ubuntu/Debian_ if you use default package installation you have to install also `libgmt-dev` package
+
+* __Coulomb 3__: [Coulomb 3, developed by USGS](https://earthquake.usgs.gov/research/software/coulomb/) 
+
+* __python__: required for some calculations included in the main script.
+
+## Usage details
+The main script is: `coulomb2gmt.sh`
+
+run: `$ ./coulomb2gmt.sh <inputfile> <inputdata> | options`
+
+* `<inputfile>`: name of input file used from Coulomb. Extention `.inp` not needed. Path to the directory of input files  configured at `default-param`.
+
+* `<inputdata>`:  Name of input files include results of coulmb calculations. Input data files are:
+
+    * `<inputdata>-gmt_fault_surface.dat`:
+    * `<inputdata>-gmt_fault_map_proj.dat`:
+    * `<inputdata>-gmt_fault_calc_dep.dat`:
+    * `<inputdata>-coulomb_out.dat`:
+    * `<inputdata>-dcff.cou`:
+
+
+
+### Default parameters
+Many parameters configured at `default-param` file.
+
+
+### General options
+
+* `-r`: set custom region parameters. _Structure_ `-r minlon maxlon minlat maxlat prjscale`
+
+* `-topo`:  plot topography using dem file
+
+* `-o`:  set custom name of output file. Default is `<inputadata>`.
+
+* `-cmt` :  Plot Centroid Moment Tensors of earthquakes. 
+
+*  `-faults`: Plot custom fault database catalogue.
+
+* `-mt`:
+
+* `-h`: Help menu
+
+* `-debug`:Enable Debug option 
+
+* `-logogmt`: Plot GMT logo and time stamp.
+
+* `-logocus`: Plot custom logo of your organization.
+
+### Plot fault parameters
+
+* `-fproj`: Plot source and receiver faults' trace at surface.
+
+* `-fsurf`: Plot surface of source and receiver faults.
+
+* `-fdep`: Plot intersection of target depth with fault plane.
+
+### Plot stress 
+* `-cstress`: Plot Coulomb Stress change.
+
+* `-sstress`: Plot Shear Stress change.
+
+* `-nstress`: Plot Normal Stress change.
+
+### Plot Strain components
+
+* `-stre**`: Where `**` you can fill all strain components `xx`,`yy`,`zz`, `yz`, `xz`, `xy`.
+
+* `-strdil`: Plot dilatation (Exx + Eyy + Ezz )
+
+### Plot gps velocities, observed and modeled
+
+* `-dgpsho`: Observed GPS horizontal displacements.
+
+* `-dgpshm`: Modeled horizontal displacements on GPS sites (Okada 1985).
+
+* `-dgpsvo`: Observed GPS vertical desplacements.
+
+* `-dgpsvm`: Modeled vertical displacements on GPS sites (Okada 1985).
+
+> Configure displacement scale in `default-param` file
+
+
+### Output formats
+Default format is `*.ps` file. You can use  the options bellow to convert  to other format and adjust paper size to map size.
+
+* `-outjpg` : Adjust and convert to JPEG.
+
+* `-outpng` : Adjust and convert to PNG (transparent where nothing is plotted)
+
+* `-outeps` : Adjust and convert to EPS"
+
+* `-outpdf` : Adjust and convert to PDF
+
+## Contributing
+
+1. Create an issue and describe your idea
+2. [Fork it](https://github.com/demanasta/coulomb2gmt/network#fork-destination-box)
+3. Create your feature branch (`git checkout -b my-new-idea`)
+4. Commit your changes (`git commit -am 'Add some feature'`)
+5. Publish the branch (`git push origin my-new-idea`)
+6. Create a new Pull Request
+7. Profit! :white_check_mark:
+
+## ChangeLog
+
+The history of releases can be viewed at [ChangeLog](ChangeLog.md)
+
+## Acknowlegments
+
+## References
+* [Coulomb 3, developed by USGS](https://earthquake.usgs.gov/research/software/coulomb/)
+
+* [The Generic Mappting Tools - GMT](http://gmt.soest.hawaii.edu/)