-

genie-main/configs/muffin.AP.445eb05X.eb_go_gs_ac_bg.PO4.SPIN.config

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+# *******************************************************************
+# CONFIGURATION TEMPLATE -- for a 16 level seasonally forced ocean
+# *******************************************************************
+
+# *******************************************************************
+# GENIE COMPONENT SELECTION
+# *******************************************************************
+# make .TRUE. the cGENIE modules to be included
+# *******************************************************************
+ma_flag_ebatmos=.TRUE.
+ma_flag_goldsteinocean=.TRUE.
+ma_flag_goldsteinseaice=.TRUE.
+ma_flag_biogem=.TRUE.
+ma_flag_atchem=.TRUE.
+ma_flag_sedgem=.FALSE.
+ma_flag_rokgem=.FALSE.
+ma_flag_gemlite=.FALSE.
+ma_flag_ecogem=.FALSE.
+# *******************************************************************
+
+# *******************************************************************
+# GRID & BOUNDARY CONDITION CONFIGURATION
+# *******************************************************************
+# insert the automatically generated muffingen parameter list here
+# *******************************************************************
+### cGENIE .config file parameter lines generated by muffingen v0.8 on: 191127 ###
+# INPUT FILE PATH
+ea_1='../../cgenie.muffin/genie-paleo/445eb05X'
+go_1='../../cgenie.muffin/genie-paleo/445eb05X'
+gs_1='../../cgenie.muffin/genie-paleo/445eb05X'
+# Grid resolution
+GENIENXOPTS='$(DEFINE)GENIENX=36'
+GENIENYOPTS='$(DEFINE)GENIENY=36'
+GOLDSTEINNLONSOPTS='$(DEFINE)GOLDSTEINNLONS=36'
+GOLDSTEINNLATSOPTS='$(DEFINE)GOLDSTEINNLATS=36'
+GOLDSTEINNLEVSOPTS='$(DEFINE)GOLDSTEINNLEVS=16'
+# Topography
+ma_fname_topo='445eb05X'
+# Assumed longitudinal offset of the grid
+gm_par_grid_lon_offset=-180
+# Ocean depth scalar (m) [internally, parameter: dsc]
+go_par_dsc=5000
+# Boundary conditions: EMBM
+ea_topo='445eb05X'
+ea_taux_u='445eb05X.taux_u.dat'
+ea_tauy_u='445eb05X.tauy_u.dat'
+ea_taux_v='445eb05X.taux_v.dat'
+ea_tauy_v='445eb05X.tauy_v.dat'
+ea_adv_u='445eb05X.wvelx.dat'
+ea_adv_v='445eb05X.wvely.dat'
+# Boundary conditions: GOLDSTEIN
+go_topo='445eb05X'
+# Boundary conditions: GOLDSTEIN sea-ice
+gs_topo='445eb05X'
+# Boundary conditions: ALBEDO!
+ea_par_albedo1d_name='445eb05X.albd.dat'
+# Boundary conditions: BIOGEM
+bg_par_pindir_name='../../cgenie.muffin/genie-paleo/445eb05X/'
+bg_par_windspeed_file='445eb05X.windspeed_uvaa.dat'
+# BIOGEM MISC
+# gas transfer coeff
+bg_par_gastransfer_a=1.044
+# Grid resolution of solid Earth components
+SEDGEMNLONSOPTS='$(DEFINE)SEDGEMNLONS=36'
+SEDGEMNLATSOPTS='$(DEFINE)SEDGEMNLATS=36'
+ROKGEMNLONSOPTS='$(DEFINE)ROKGEMNLONS=36'
+ROKGEMNLATSOPTS='$(DEFINE)ROKGEMNLATS=36'
+# Topography for solid Earth components
+sg_par_pindir_name='../../cgenie.muffin/genie-paleo/445eb05X/'
+sg_par_sed_topo_D_name='445eb05X.depth.dat'
+sg_par_sed_reef_mask_name='445eb05X.reefmask.dat'
+sg_par_sedcore_save_mask_name='445eb05X.sedcoremask.dat'
+rg_par_pindir_name='../../cgenie.muffin/genie-paleo/445eb05X/'
+rg_topo='445eb05X.k1'
+# GEOLOGIC AGE DEPENDENT PARAMETERS
+# Solar constant (W m-2) ... don't forget to adjust it if not modern!!
+ma_genie_solar_constant=1318.1
+# ... also, salinity should be set 1 PSU lower if it an ice-free World
+go_saln0=34.9
+# Orbital parameters (modern, defaults)
+ea_par_orbit_osce=0.0 # eccentricity
+ea_par_orbit_oscsob=0.3746066 # sine of obliquity
+ea_par_orbit_oscgam=90 # longitude of perihelion
+# Ocean Mg/Ca concentrations (modern defaults, mol kg-1)
+bg_ocn_init_35=1.028E-02
+bg_ocn_init_50=5.282E-02
+
+# <<< >>>
+# *******************************************************************
+
+# *******************************************************************
+# TRACER CONFIGURATION
+# *******************************************************************
+# the total number of tracers includes T and S
+# T and S do not need to be explicited selected and initialzied
+# *******************************************************************
+# Set number of tracers
+GOLDSTEINNTRACSOPTS='$(DEFINE)GOLDSTEINNTRACS=16' # nb ocean + 2
+# list selected biogeochemical tracers
+# look here: /home/lobster/cgenie.muffin/genie-main/data/input/define*
+# here I use the tracers and initial values after of cgenie.eb_go_gs_ac_bg_sg_rg.worjh2.BASES.config
+# ... with initial vlaues after this file as well
+# ... except bg_ocn_init_35 and bg_ocn_init_50 (commented out) because defined by muffingen above
+# ... plus 48 and 49 for the age tracer
+# Just uncomment tracers 92, 93 and 94 + initial values and set GOLDSTEINNTRACS above to 19 instead of 16 to allow the iodine cycle
+# ... and uncomment sed_tracer 79 line
+gm_atm_select_3=.true.
+gm_atm_select_4=.true.
+gm_atm_select_6=.true.
+gm_atm_select_16=.true.
+gm_ocn_select_3=.true.
+gm_ocn_select_4=.true.
+gm_ocn_select_8=.true.
+gm_ocn_select_10=.true.
+gm_ocn_select_12=.true.
+gm_ocn_select_15=.true.
+gm_ocn_select_16=.true.
+gm_ocn_select_20=.true.
+gm_ocn_select_35=.true.
+gm_ocn_select_38=.true.
+gm_ocn_select_40=.true.
+gm_ocn_select_48=.true.
+gm_ocn_select_49=.true.
+gm_ocn_select_50=.true.
+#gm_ocn_select_92=.true.
+#gm_ocn_select_93=.true.
+#gm_ocn_select_94=.true.
+gm_sed_select_3=.true.
+gm_sed_select_4=.true.
+gm_sed_select_8=.true.
+gm_sed_select_14=.true.
+gm_sed_select_15=.true.
+gm_sed_select_22=.true.
+gm_sed_select_32=.true.
+gm_sed_select_33=.true.
+gm_sed_select_34=.true.
+gm_sed_select_36=.true.
+#gm_sed_select_79=.true.
+# <<< >>>
+# list biogeochemical tracer initial values
+# Set tracer initial values
+ac_atm_init_3=278.0E-06
+ac_atm_init_4=-6.5
+ac_atm_init_6=0.2095
+bg_ocn_init_3=2.244E-03
+bg_ocn_init_4=0.4
+bg_ocn_init_8=2.159E-06
+bg_ocn_init_10=1.696E-04
+bg_ocn_init_12=2.363E-03
+#bg_ocn_init_35=1.025E-02
+bg_ocn_init_38=2.916E-02
+bg_ocn_init_48=0.0
+bg_ocn_init_49=0.0
+#bg_ocn_init_50=5.282E-02
+#bg_ocn_init_92=0.0E-09
+#bg_ocn_init_93=500.0E-09
+#bg_ocn_init_94=0.0E-09
+# <<< >>>
+# *******************************************************************
+
+# *******************************************************************
+# PHYSICAL CLIMATE CALIBRATION
+# *******************************************************************
+# based on Cao et al. [2009] with the following exceptions:
+# (1) warmer ocean start (could be 10C for a more intense greenhouse world)
+# (2) scaling of the freshwater re-balancing flux to zero
+# (3) application of a reduced sea-ice diffusivity and 
+# prescribed maximum fractional area for sea-ice advection
+# (4) no diffusivity scaling factor over Antarctica
+# *******************************************************************
+# rel
+go_12=0.9000000
+# scl_tau / SclTau
+go_13=1.531013488769531300
+# ocean diffusivites iso (or horiz) / OcnHorizDiff
+go_14=1494.438354492187500000
+# ocean diffusivites dia (or vert) / OcnVertDiff
+go_15=0.000025363247914356
+# inverse minimum drag in days / InvDrag
+go_16=2.710164785385131800
+# scl_tau (should be same as GOLDSTEIN's value) / SclTau
+ea_11=1.531013488769531300
+# atm. diff. amp. for T / AtmDiffAmpT
+ea_12=5204945.000000000000000000
+# atm. diff. amp. for q / AtmDiffAmpQ
+ea_13=1173269.250000000000000000
+# dist'n width / AtmDiffWidthT
+ea_14=1.410347938537597700
+# dist'n slope / AtmDiffSlopeT
+ea_15=0.090003050863742828
+# atm. advection factor for T_z / AtmAdvectCoeffTm
+ea_16=0.001037851092405617
+# atm. advection factor for T_m / AtmAdvectCoeffQm
+ea_17=0.0000000E+00
+# atm. advection factor for q_z / AtmAdvectCoeffQz
+ea_18=0.164652019739151000
+# atm. advection factor for q_m / AtmAdvectCoeffQz
+ea_19=0.164652019739151000
+# temp0 -- start with a warm ocean
+go_10=5.0
+# temp1 -- start with a warm ocean
+go_11=5.0
+# SclFWF -- scale for zero freshwater re-balancing
+ea_28=0.0
+# reduced sea-ice eddy diffusivity
+gs_11=1000.000
+# set a fractional sea-ce coverage threshold for preventing advection
+gs_par_sica_thresh=0.99
+# set seasonal cycle
+ea_dosc=.true.
+go_dosc=.true.
+gs_dosc=.true.
+# *******************************************************************
+
+# *******************************************************************
+# USER-APPENDED OPTIONS FOLLOW ...
+# *******************************************************************
+# (the following parameter text is appended automatically)
+# *******************************************************************