Releases: donovan-h-parks/RefineM
Releases · donovan-h-parks/RefineM
0.1.2
0.1.1
- port to Python 3
- updated shebang to require python3
0.0.25
- Updated setup.py to include pysam
0.0.24
- improved handling and error reporting for Pearson's correlation
0.0.23
- implemented workaround for FloatingPointError when using numpy.mean on small number (e.g., 1e-310)
0.0.22
- added HMMs for identifying 16S rRNA genes
- better support for bins containing a single contig
0.0.21
- Previous versions use both a mean absolute error and correlation criteria to identify contigs with divergent coverage profiles. Starting with this version, only the mean absolute error criteria is used by default. The correlation criteria can be misleading with fewer than 6 data points (i.e., BAM files) so is not used by default.
0.0.20
- minor updates for compatibility with biolib v0.0.45
0.0.17
- improved identification of taxonomic outliers
0.0.15
- fixed small dependency bug in setup.py
- cleaned up README.rst
- thanks to Tim Savannah for these fixes