Updated license headers to 2013. Happy new year!

draeger-lab · Jan 4, 2013 · 832138c · 832138c
1 parent 367ef5a
commit 832138c
Show file tree

Hide file tree

Showing 40 changed files with 41 additions and 40 deletions.
diff --git a/resources/de/zbit/kegg/html/about.html b/resources/de/zbit/kegg/html/about.html
@@ -4,7 +4,7 @@
   </head>
   <body>
     <p>
-      KEGGtranslator Copyright &#169; 2010 Clemens Wrzodek and 
+      KEGGtranslator Copyright &#169; 2010-2013 Clemens Wrzodek and 
       Andreas Dr&#228;ger, Center for Bioinformatics T&#252;bingen 
       (ZBIT), Germany.
 	</p><p>

diff --git a/src/de/zbit/graph/CollapseGroupNodesViewMode.java b/src/de/zbit/graph/CollapseGroupNodesViewMode.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to obtain the
  * latest version of KEGGtranslator.
  * 
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  * 
  * KEGGtranslator is free software; you can redistribute it and/or modify it
  * under the terms of the GNU Lesser General Public License as published by the

diff --git a/src/de/zbit/graph/LineNodeRealizer.java b/src/de/zbit/graph/LineNodeRealizer.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/graph/MinAndMaxTracker.java b/src/de/zbit/graph/MinAndMaxTracker.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/graph/SearchSupport.java b/src/de/zbit/graph/SearchSupport.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/graph/StackingNodeLayout.java b/src/de/zbit/graph/StackingNodeLayout.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/gui/prefs/GeneralOptionPanel.java b/src/de/zbit/gui/prefs/GeneralOptionPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/gui/prefs/PreferencePanels.java b/src/de/zbit/gui/prefs/PreferencePanels.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/gui/prefs/TranslatorPanelOptionPanel.java b/src/de/zbit/gui/prefs/TranslatorPanelOptionPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/KEGGtranslatorCommandLineOnlyOptions.java b/src/de/zbit/kegg/KEGGtranslatorCommandLineOnlyOptions.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/KEGGtranslatorOptions.java b/src/de/zbit/kegg/KEGGtranslatorOptions.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/Translator.java b/src/de/zbit/kegg/Translator.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/ext/KEGGTranslatorPanelOptions.java b/src/de/zbit/kegg/ext/KEGGTranslatorPanelOptions.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatePathwayDialog.java b/src/de/zbit/kegg/gui/TranslatePathwayDialog.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorBioPAXPanel.java b/src/de/zbit/kegg/gui/TranslatorBioPAXPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorGraphPanel.java b/src/de/zbit/kegg/gui/TranslatorGraphPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorPanelTools.java b/src/de/zbit/kegg/gui/TranslatorPanelTools.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorSBGNPanel.java b/src/de/zbit/kegg/gui/TranslatorSBGNPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorSBMLPanel.java b/src/de/zbit/kegg/gui/TranslatorSBMLPanel.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/gui/TranslatorUI.java b/src/de/zbit/kegg/gui/TranslatorUI.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/AbstractKEGGtranslator.java b/src/de/zbit/kegg/io/AbstractKEGGtranslator.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/BatchKEGGtranslator.java b/src/de/zbit/kegg/io/BatchKEGGtranslator.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/CellDesignerUtils.java b/src/de/zbit/kegg/io/CellDesignerUtils.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/FixFiles.java b/src/de/zbit/kegg/io/FixFiles.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2BioPAX.java b/src/de/zbit/kegg/io/KEGG2BioPAX.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2BioPAX_level2.java b/src/de/zbit/kegg/io/KEGG2BioPAX_level2.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2BioPAX_level3.java b/src/de/zbit/kegg/io/KEGG2BioPAX_level3.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2SBGN.java b/src/de/zbit/kegg/io/KEGG2SBGN.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2SBMLGroupExtension.java b/src/de/zbit/kegg/io/KEGG2SBMLGroupExtension.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2SBMLLayoutExtension.java b/src/de/zbit/kegg/io/KEGG2SBMLLayoutExtension.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2SBMLqual.java b/src/de/zbit/kegg/io/KEGG2SBMLqual.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGG2jSBML.java b/src/de/zbit/kegg/io/KEGG2jSBML.java
@@ -8,7 +8,8 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
+ * 
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License
  * as published by the Free Software Foundation. A copy of the license

diff --git a/src/de/zbit/kegg/io/KEGG2yGraph.java b/src/de/zbit/kegg/io/KEGG2yGraph.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGGImporter.java b/src/de/zbit/kegg/io/KEGGImporter.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/KEGGtranslatorIOOptions.java b/src/de/zbit/kegg/io/KEGGtranslatorIOOptions.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/kegg/io/SBOMapping.java b/src/de/zbit/kegg/io/SBOMapping.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2010-2012 by the University of Tuebingen, Germany.
+ * Copyright (C) 2010-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/util/Relation2Reaction.java b/src/de/zbit/util/Relation2Reaction.java
@@ -8,7 +8,7 @@
 // * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
 // * obtain the latest version of KEGGtranslator.
 // *
-// * Copyright (C) 2011 by the University of Tuebingen, Germany.
+// * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
 // *
 // * KEGGtranslator is free software; you can redistribute it and/or 
 // * modify it under the terms of the GNU Lesser General Public License

diff --git a/src/de/zbit/util/TranslatorTools.java b/src/de/zbit/util/TranslatorTools.java
@@ -8,7 +8,7 @@
  * <http://www.cogsys.cs.uni-tuebingen.de/software/KEGGtranslator> to
  * obtain the latest version of KEGGtranslator.
  *
- * Copyright (C) 2011 by the University of Tuebingen, Germany.
+ * Copyright (C) 2011-2013 by the University of Tuebingen, Germany.
  *
  * KEGGtranslator is free software; you can redistribute it and/or 
  * modify it under the terms of the GNU Lesser General Public License

diff --git a/test/de/zbit/kegg/gui/ReactionPanelTest.java b/test/de/zbit/kegg/gui/ReactionPanelTest.java
@@ -1,5 +1,5 @@
 /*
- * Copyright (c) 2011 Center for Bioinformatics of the University of Tuebingen.
+ * Copyright (c) 2011-2013 Center for Bioinformatics of the University of Tuebingen.
  * 
  * This file is part of KEGGtranslator, a program to convert KGML files from the
  * KEGG database into various other formats, e.g., SBML, GraphML, and many more.

diff --git a/test/de/zbit/kegg/test/BatchKEGGtranslatorTest.java b/test/de/zbit/kegg/test/BatchKEGGtranslatorTest.java
@@ -1,5 +1,5 @@
 /*
- * Copyright (c) 2011 Center for Bioinformatics of the University of Tuebingen.
+ * Copyright (c) 2011-2013 Center for Bioinformatics of the University of Tuebingen.
  * 
  * This file is part of KEGGtranslator, a program to convert KGML files from the
  * KEGG database into various other formats, e.g., SBML, GraphML, and many more.