New functionnalities
- correct (WIP, experimental) corrects the graph by adding missing information back into it.
- multigrapher creates interactive graph representation of the differnces between two pangenome graphs
- compress (WIP, experimental) compresses the graph by collapsing substitution bubbles, losselessly
- unfold (WIP, experimental) break cycles in the graph by adding nodes and edges in it
What's Changed
- ✨ Adding cycle breaking
unfold
command by @Tharos-ux in #18 - 🐛 Fix issue #19, #20 with changes in
main
andgrapher
by @Tharos-ux in #21 - 🧵 Adding multithreading on
edit
by @Tharos-ux in #22 - ⬆️ Fix dependencies and deprecate
isolate_by_range.py
by @Tharos-ux in #23 - ➖ Fix
main.py
imports by @Tharos-ux in #24 - 🔊 Add basic logs for
edit_distance
by @Tharos-ux in #25 - 🐛 Fix
typeerror
on arg for edition by @Tharos-ux in #26 - ⚡️ Adding low-memory profile for graph loading by @Tharos-ux in #27
- 🔊 Adding logs for
edit_distance
by @Tharos-ux in #28 - Pattern exclusion, memory tracing and toy examples update by @Tharos-ux in #29
- 📈 Add memory tracking in
edit_distance
by @Tharos-ux in #30 - Main by @Tharos-ux in #31
- Main by @Tharos-ux in #32
- Main by @Tharos-ux in #33
- 🚑️ Add security on
orientation_view
accesses by @Tharos-ux in #34 - Adding
multigrapher
to the palette of tools by @Tharos-ux in #35 - Add timing for HPRC experiment by @Tharos-ux in #36
- ⚡️ Improving performance of
pancat edit
,pancat grapher
and `panc… by @Tharos-ux in #37 - Main by @Tharos-ux in #38
- Build
0.3.0
by @Tharos-ux in #39
Full Changelog: v0.2.0...v0.3.0