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EchoNet MR

Running Inference

Run the following in the command line, specifying arguments:

python predict.py --MR_label_col <MR_label_col> --manifest_path <manifest_path> --data_path <data_path>

--MR_label_col: specify column where your ground truth labels are present
--manifest_path: Path to your manifest
--data_path: Path to AVIs

ex: python predict.py --MR_label_col MR_severity --manifest_path C:\Users\Remote\Documents\Amey\MR\manifest_for_testing_ext_val_repo.csv --data_path D:\amey\stanford_echos_MR_ext_val

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Obtaining Stats and Figures

After running predict.py, run all cells in the notebook "analyze_predictions.ipynb"

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