Run the following in the command line, specifying arguments:
python predict.py --MR_label_col <MR_label_col> --manifest_path <manifest_path> --data_path <data_path>
--MR_label_col: specify column where your ground truth labels are present
--manifest_path: Path to your manifest
--data_path: Path to AVIs
ex: python predict.py --MR_label_col MR_severity --manifest_path C:\Users\Remote\Documents\Amey\MR\manifest_for_testing_ext_val_repo.csv --data_path D:\amey\stanford_echos_MR_ext_val
![image](https://private-user-images.githubusercontent.com/111397367/296063311-42a1751f-f8da-41f7-bcf4-2d6b419a3777.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MjYwODgzODIsIm5iZiI6MTcyNjA4ODA4MiwicGF0aCI6Ii8xMTEzOTczNjcvMjk2MDYzMzExLTQyYTE3NTFmLWY4ZGEtNDFmNy1iY2Y0LTJkNmI0MTlhMzc3Ny5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwOTExJTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDkxMVQyMDU0NDJaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT01ODhjMWNkYTk4MDYxYWI0NmM4Y2I3YmY0ODIxMzE4OWMyY2JhZjFlOThhZTIxOGJhOWFmZTVjZWIzMzI0MDBjJlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.TU7QovCh3HlF4aNS0R8jEFL-oKzj1nWjdefXjIZuYGM)
After running predict.py, run all cells in the notebook "analyze_predictions.ipynb"
![image](https://private-user-images.githubusercontent.com/111397367/296067431-03b51ec7-f062-4c7d-8657-3be85d49128c.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MjYwODgzODIsIm5iZiI6MTcyNjA4ODA4MiwicGF0aCI6Ii8xMTEzOTczNjcvMjk2MDY3NDMxLTAzYjUxZWM3LWYwNjItNGM3ZC04NjU3LTNiZTg1ZDQ5MTI4Yy5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwOTExJTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDkxMVQyMDU0NDJaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT0wYTk2MzYyNzIzYjQ2OGJjOGUwNDc0ZDJlMWYzMWE2YjRmMzhiYmQ2YjRmZTc0YmE1OGZmMDQ1OTQ4YzQwNTYwJlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.L9lwiIVKH8gvV20ramMybINwl6gcgjNQS-4id5Eq55E)