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Register and use non-default MPI communicators in Atlas objects #159

Merged
merged 43 commits into from
Sep 21, 2023
Merged

Register and use non-default MPI communicators in Atlas objects #159

merged 43 commits into from
Sep 21, 2023

Commits on Sep 20, 2023

  1. Capability to access mpi comm by name

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  2. Add "mpi_comm" configuration option to StructuredMeshGenerator

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  3. Add mpi::Scope, mpi::push, mpi::pop to easily switch default MPI comm… 

    …unicator
    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  4. Implement Mesh(grid,...,config) supporting "mpi_comm" configuration

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  5. Rename nb_partitions and partition to nb_parts and part

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  6. Clean atlas_test_meshgen_splitcomm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  7. Add MPI scope to mesh::actions for BuildParallelFields, BuildPeriodic… 

    …Boundaries, BuildHalo, BuildEdges
    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  8. Add FunctionSpace::mpi_comm()

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  9. Use mpi_comm in GmshIO

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  10. Test gmsh mesh writing with mpi_comm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  11. Add custom mpi_comm to HaloExchange::setup

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  12. Add custom mpi_comm to GatherScatter::setup

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  13. Add custom mpi_comm to Checksum::setup

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  14. Use mesh mpi_comm in functionspace NodeColumns

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  15. Use mesh mpi_comm in functionspace CellColumns

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  16. Use mesh mpi_comm in functionspace EdgeColumns

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  17. Use mpi_comm in StructuredColumns

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  18. Add atlas_test_functionspace_splitcomm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  19. Register mpi_comm in Mesh with MeshBuilder for further use

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  20. Use mesh mpi_comm in mesh::PartitionPolygon and mesh::PartitionGraph

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  21. Use functionspace mpi_comm in grid::StructuredPartitionPolygon

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  22. Test mpi_comm with mesh partitionGraph and polygons

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  23. Use mpi_comm of partitioned in MatchingPartitioners

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  24. Test MatchingPartitioner in atlas_test_meshgen_splitcomm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  25. Test MatchingPartitioner in atlas_test_functionspace_splitcomm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  26. Configurable mpi_comm in atlas::grid::Partitioner

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  27. SerialDistribution with part argument

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  28. Rework Partitioners

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  29. fixup structuredcolumns

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  30. StructuredColumns inspects Partitioner for mpi_comm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  31. Mesh(grid,partitioner) constructor inspects partitioner for mpi_comm

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  32. Test mpi_comm with Mesh(grid,partitioner)

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  33. Use mpi_comm in EqualRegionsPartitioner

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  34. Add test of mpi_comm with partitioners

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  35. Use mpi_comm in CubedSphere(Dual)MeshGenerator

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  36. Use mpi_comm in Redistribute

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  37. Make Partitioner(std::string) explicit

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  38. Use mpi_comm in DelaunayMeshGenerator

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  39. Add Configuration to PointCloud

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  40. Use mpi_comm in functionspace::PointCloud

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  41. Add mpi_comm to RegularMeshgenerator

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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  42. Add mpi_comm to HealpixMeshgenerator

    @wdeconinck
    wdeconinck committed Sep 20, 2023
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Commits on Sep 21, 2023

  1. Add test for mpi_comm with functionspace::BlockStructuredColumns

    @wdeconinck
    wdeconinck committed Sep 21, 2023
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