Set number of threads for ips4o::parallel::sort #79
Workflow file for this run
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| on: [ push, pull_request ] | |
| name: build and test | |
| jobs: | |
| build_and_test: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| arch: x86_64 | |
| - os: ubuntu-latest | |
| arch: aarch64 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: 'recursive' | |
| - name: Install required packages | |
| if: matrix.os == 'ubuntu-latest' && matrix.arch == 'x86_64' | |
| run: sudo apt-get update && sudo apt-get install -y | |
| git | |
| bash | |
| cmake | |
| make | |
| g++ | |
| libatomic-ops-dev | |
| autoconf | |
| libgsl-dev | |
| zlib1g-dev | |
| libzstd-dev | |
| libjemalloc-dev | |
| - name: Build seqwish for Linux x86_64 | |
| if: matrix.os == 'ubuntu-latest' && matrix.arch == 'x86_64' | |
| run: cmake -H. -DCMAKE_BUILD_TYPE=Debug -DCMAKE_C_FLAGS="-mcx16" -DCMAKE_CXX_FLAGS="-mcx16" -Bbuild && cmake --build build -- -j 2 | |
| - name: Execute tests for Linux x86_64 | |
| if: matrix.os == 'ubuntu-latest' && matrix.arch == 'x86_64' | |
| run: cd test && ASAN_OPTIONS=detect_leaks=1:symbolize=1 LSAN_OPTIONS=verbosity=0:log_threads=1 make test | |
| - name: Build and test seqwish for Linux ${{ matrix.arch }} | |
| if: matrix.os == 'ubuntu-latest' && matrix.arch != 'x86_64' | |
| uses: uraimo/run-on-arch-action@v2 | |
| with: | |
| arch: ${{ matrix.arch }} | |
| distro: ubuntu20.04 | |
| githubToken: ${{ github.token }} | |
| dockerRunArgs: | | |
| --volume "${PWD}:/seqwish" | |
| install: | | |
| apt-get update -q -y | |
| apt-get install -q -y \ | |
| cmake \ | |
| make \ | |
| g++ \ | |
| git \ | |
| file \ | |
| libatomic-ops-dev \ | |
| autoconf \ | |
| libgsl-dev \ | |
| zlib1g-dev \ | |
| libzstd-dev \ | |
| libjemalloc-dev | |
| run: | | |
| cd /seqwish | |
| cmake -H. -DCMAKE_BUILD_TYPE=Release -DEXTRA_FLAGS="-march=armv8-a" -Bbuild && cmake --build build -- -j 2 | |
| file bin/seqwish | |
| cd test && make test |