Merge branch 'fix-qual-float-issue' into 'dev'

Fix QUAL float issue See merge request epi2melabs/workflow-containers/wf-artic!27
epi2me-labs · May 18, 2021 · acd495b · acd495b
2 parents 7800f16 + dcfaa11
commit acd495b
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/bin/genotype_summary.py b/bin/genotype_summary.py
@@ -64,6 +64,8 @@ def extract_calls(df, chrom, pos, ref):
     if df_calls.empty:
         return []
 
+    df_calls[QUAL] = pd.to_numeric(df_calls[QUAL])
+
     calls_list = []
     for call in df_calls.to_dict('records'):
         calls_list.append({