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@github-actions github-actions released this 01 Oct 07:54
· 75 commits to master since this release

🎉 Nanoq rewrite 🎉

  • more rusty code around the needletail parser (rm rust-bio) which provides superior performance
  • ultra fast mode (--fast) that ignores quality scores and speeds up read iterations (see benchmarks)
  • better explanation of benchmarks for replication, included rust-bio-tools sequence stats
  • more minimal implementation of filters and summary reports (rm filtlong analogues)
  • better command line interface with structopt
  • output compression with niffler
  • continuous integration actions
  • release binaries
  • conda recipe