Add a fetcher for AWS S3 Argo GDAC data #1158
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name: CI tests | |
# CI tests ran every time new code is pushed to the repo | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches-ignore: | |
- 'dependabot*' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
permissions: | |
id-token: write | |
contents: read | |
jobs: | |
detect-ci-skip: | |
name: detect ci skip | |
runs-on: ubuntu-latest | |
if: | | |
github.repository == 'euroargodev/argopy' | |
&& (github.event_name == 'push' || github.event_name == 'pull_request') | |
outputs: | |
skipped: ${{ steps.detect-skip.outputs.trigger-found }} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 2 | |
- uses: xarray-contrib/ci-trigger@v1.2 | |
id: detect-skip | |
with: | |
keyword: "[skip-ci]" | |
core-pinned: | |
# CI tests for environments with core requirements in pinned versions | |
# All commits must pass this | |
name: Core - Pinned - Py${{matrix.python-version}} - ${{ matrix.os }} | |
needs: detect-ci-skip | |
runs-on: ${{ matrix.os }} | |
if: needs.detect-ci-skip.outputs.skipped == 'false' | |
defaults: | |
run: | |
shell: bash -l {0} | |
continue-on-error: ${{ matrix.experimental }} | |
# timeout-minutes: 45 | |
strategy: | |
max-parallel: 12 | |
fail-fast: false | |
matrix: | |
python-version: ["3.10", "3.11"] | |
os: ["ubuntu-latest", "windows-latest", "macos-latest"] | |
experimental: [false] | |
steps: | |
- name: Energy Estimation - Initialize | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
with: | |
task: start-measurement | |
company-uuid: ${{ secrets.CARBONDB_COMPANY_UUID }} | |
project-uuid: ${{ secrets.CARBONDB_PROJECT_UUID }} | |
machine-uuid: ${{ secrets.CARBONDB_MACHINE_UUID_PYTESTS }} | |
continue-on-error: true | |
- uses: actions/checkout@v4 | |
- name: Configure AWS Credentials | |
uses: aws-actions/configure-aws-credentials@v4.0.2 | |
with: | |
aws-region: us-west-1 | |
role-to-assume: arn:aws:iam::${{ secrets.AWS_ACCOUNT_ID }}:role/ga-ci-tests-argopy-01 | |
- name: Set environment variables | |
run: | | |
echo "CONDA_ENV_FILE=ci/requirements/py${{matrix.python-version}}-core-pinned.yml" >> $GITHUB_ENV | |
echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV | |
echo "LOG_FILE=argopy-tests-Core-Pinned-Py${{matrix.python-version}}-${{matrix.os}}.log" >> $GITHUB_ENV | |
- name: Setup Micromamba ${{ matrix.python-version }} | |
uses: mamba-org/setup-micromamba@v2 | |
with: | |
micromamba-version: '1.5.10-0' | |
environment-name: argopy-tests | |
environment-file: ${{ env.CONDA_ENV_FILE }} | |
init-shell: bash | |
cache-environment: true | |
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}" | |
create-args: >- | |
python=${{matrix.python-version}} | |
- name: Install argopy | |
run: | | |
python -m pip install --no-deps -e . | |
- name: Version info | |
run: | | |
micromamba info | |
micromamba list | |
- name: Energy Estimation - Measure Tests Setup | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: get-measurement | |
label: 'setup core-pinned' | |
continue-on-error: true | |
- name: Lint with flake8 | |
run: | | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
pytest -ra -v -s -c argopy/tests/pytest.ini --durations=10 --cov=./ --cov-config=.coveragerc --cov-report xml:cov.xml --cov-report term-missing --log-file=${{env.LOG_FILE}} --junitxml=junit.xml -o junit_family=legacy | |
- name: Energy Estimation - Measure Tests Exec | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: get-measurement | |
label: 'pytest core-pinned' | |
continue-on-error: true | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v4.6.0 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
file: ./cov.xml | |
flags: unittests, core, pinned, py${{matrix.python-version}} | |
name: codecov-github | |
fail_ci_if_error: false | |
env_vars: RUNNER_OS,PYTHON_VERSION | |
- name: Upload test results to Codecov | |
if: ${{ !cancelled() }} | |
uses: codecov/test-results-action@v1 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
- name: Save tests log as artifact | |
uses: actions/upload-artifact@v4 | |
with: | |
name: Argopy-Tests-Core-${{matrix.python-version}}-${{matrix.os}} | |
path: ${{env.LOG_FILE}} | |
retention-days: 90 | |
- name: Energy Estimation - Show Results | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: display-results | |
send-data: true | |
continue-on-error: true | |
all-pinned: | |
# CI tests for environments with all requirements in pinned versions | |
# All commits must pass this | |
name: All - Pinned - Py${{matrix.python-version}} - ${{ matrix.os }} | |
needs: detect-ci-skip | |
runs-on: ${{ matrix.os }} | |
if: needs.detect-ci-skip.outputs.skipped == 'false' | |
defaults: | |
run: | |
shell: bash -l {0} | |
continue-on-error: ${{ matrix.experimental }} | |
# timeout-minutes: 45 | |
strategy: | |
max-parallel: 12 | |
fail-fast: false | |
matrix: | |
python-version: ["3.10", "3.11"] | |
os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
experimental: [false] | |
steps: | |
- name: Energy Estimation - Initialize | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
with: | |
task: start-measurement | |
company-uuid: ${{ secrets.CARBONDB_COMPANY_UUID }} | |
project-uuid: ${{ secrets.CARBONDB_PROJECT_UUID }} | |
machine-uuid: ${{ secrets.CARBONDB_MACHINE_UUID_PYTESTS }} | |
continue-on-error: true | |
- uses: actions/checkout@v4 | |
- name: Configure AWS Credentials | |
uses: aws-actions/configure-aws-credentials@v4.0.2 | |
with: | |
aws-region: us-west-1 | |
role-to-assume: arn:aws:iam::${{ secrets.AWS_ACCOUNT_ID }}:role/ga-ci-tests-argopy-01 | |
- name: Set environment variables | |
run: | | |
echo "CONDA_ENV_FILE=ci/requirements/py${{matrix.python-version}}-all-pinned.yml" >> $GITHUB_ENV | |
echo "PYTHON_VERSION=${{matrix.python-version}}" >> $GITHUB_ENV | |
echo "LOG_FILE=argopy-tests-All-Pinned-Py${{matrix.python-version}}-${{matrix.os}}.log" >> $GITHUB_ENV | |
- name: Setup Micromamba ${{ matrix.python-version }} | |
uses: mamba-org/setup-micromamba@v2 | |
with: | |
micromamba-version: '1.5.10-0' | |
environment-name: argopy-tests | |
environment-file: ${{ env.CONDA_ENV_FILE }} | |
init-shell: bash | |
cache-environment: true | |
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}" | |
create-args: >- | |
python=${{matrix.python-version}} | |
- name: Install argopy | |
run: | | |
python -m pip install --no-deps -e . | |
- name: Version info | |
run: | | |
micromamba info | |
micromamba list | |
- name: Energy Estimation - Measure Tests Setup | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: get-measurement | |
label: 'setup all-pinned' | |
continue-on-error: true | |
- name: Lint with flake8 | |
run: | | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
pytest -ra -v -s -c argopy/tests/pytest.ini --durations=10 --cov=./ --cov-config=.coveragerc --cov-report xml:cov.xml --cov-report term-missing --log-file=${{env.LOG_FILE}} --junitxml=junit.xml -o junit_family=legacy | |
- name: Energy Estimation - Measure Tests Exec | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: get-measurement | |
label: 'pytest all-pinned' | |
continue-on-error: true | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v4.6.0 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
file: ./cov.xml | |
flags: unittests, all, pinned, py${{matrix.python-version}} | |
name: codecov-github | |
fail_ci_if_error: false | |
env_vars: RUNNER_OS,PYTHON_VERSION | |
- name: Upload test results to Codecov | |
if: ${{ !cancelled() }} | |
uses: codecov/test-results-action@v1 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
- name: Upload tests log to GA | |
uses: actions/upload-artifact@v4 | |
with: | |
name: Argopy-Tests-All-${{matrix.python-version}}-${{matrix.os}} | |
path: ${{env.LOG_FILE}} | |
retention-days: 90 | |
- name: Energy Estimation - Show Results | |
if: ${{matrix.os == 'ubuntu-latest'}} | |
uses: green-coding-solutions/eco-ci-energy-estimation@v4.0-rc3 | |
env: | |
ELECTRICITY_MAPS_TOKEN: ${{ secrets.ELECTRICITY_MAPS_TOKEN }} | |
with: | |
task: display-results | |
send-data: true | |
continue-on-error: true |