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Pipeline version 0.8

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@fischuu fischuu released this 28 Apr 08:22
· 257 commits to main since this release
9a3448c

0.7.16: * Bugfix: MockReference refinement filtered as character, not numerical
0.7.15: * Removed the NVME disc areas for the default run configuration
0.7.14: * Email notification for slurm jobs added
0.7.13: * Mock reference evaluation target rule added (MockEval)
0.7.12: * New output target rule MockEval added
0.7.11: * New output target rule QC added
0.7.10: * Final report: Average mapping rate for reference genome added
0.7.9 : * Final Report: Length of final mock reference in bases added to the report
0.7.8 : * Bugfix: Wrong vcf output path for calling variants with reference genome
0.7.7 : * Bugfix: Wrong vcf output path for calling variants with existing mockref
0.7.6 : * Bugfix: Wrong path given for filtering existing mock ref variants
0.7.5 : * Distribution of the bp postion of the variants added
0.7.4 : * Bugfix: Wrong vcf was analysed in final report
0.7.3 : * Conditional inputs for existing mock added (pipeline recognises now if it should perform that branch of the analysis or not)
0.7.2 : * Variant calling for existing mock reference added
0.7.1 : * Structure of final report adjusted