Here you find code to do population genetic analysis of wheat powdery mildew, this is NOT the branch associated with the publication Population genomics and molecular epidemiology of wheat powdery mildew in Europe Jigisha et al.. That branch can be found here.
- Data preparation
- Population structure and spatial population genetics
- Demographic inference
- Genome scans and summary statistics
- Dispersal estimate and ancestor locations
- AvrPm17
- Redundancy analysis