Use lowercase function names everywhere

(also in tests)
fmi-faim · Jul 29, 2024 · 64fea52 · 64fea52
1 parent 1016841
commit 64fea52
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Showing 17 changed files with 8 additions and 8 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -123,7 +123,7 @@ source = "vcs"
 ignore = ["FA100", "S101"]
 
 [tool.ruff.lint.extend-per-file-ignores]
-"**/tests/*" = ["F811", "INP001", "N802", "SLF001"]
+"**/tests/*" = ["F811", "INP001", "SLF001"]
 "**/examples/*" = ["INP001"]
 
 [tool.setuptools_scm]

diff --git a/tests/alignment/test_alignment.py b/tests/alignment/test_alignment.py
@@ -38,7 +38,7 @@ def tiles() -> list[Tile]:
     ]
 
 
-def test_StageAlignment(tiles):
+def test_stage_alignment(tiles):
     from faim_ipa.alignment import StageAlignment
 
     alignment = StageAlignment(tiles)
@@ -53,7 +53,7 @@ def test_StageAlignment(tiles):
         assert tile.position.x in [0, 511, 512, 522]
 
 
-def test_GridAlignment(tiles):
+def test_grid_alignment(tiles):
     from faim_ipa.alignment import GridAlignment
 
     alignment = GridAlignment(tiles)
@@ -68,7 +68,7 @@ def test_GridAlignment(tiles):
         assert tile.position.x in [0, 512]
 
 
-def test_AbstractAlignment(tiles):
+def test_abstract_alignment(tiles):
     from faim_ipa.alignment.alignment import AbstractAlignment
 
     with pytest.raises(TypeError):

diff --git a/tests/hcs/cellvoyager/__init__.py b/tests/hcs/cellvoyager/__init__.py
diff --git a/.../hcs/cellvoyager/test_StackAcquisition.py → ...hcs/cellvoyager/test_stack_acquisition.py b/.../hcs/cellvoyager/test_StackAcquisition.py → ...hcs/cellvoyager/test_stack_acquisition.py
diff --git a/...oyager/test_CellVoyagerWellAcquisition.py → .../hcs/cellvoyager/test_well_acquisition.py b/...oyager/test_CellVoyagerWellAcquisition.py → .../hcs/cellvoyager/test_well_acquisition.py
diff --git a/...voyager/test_ZAdjustedStackAcquisition.py → ...ager/test_z_adjusted_stack_acquisition.py b/...voyager/test_ZAdjustedStackAcquisition.py → ...ager/test_z_adjusted_stack_acquisition.py
diff --git a/tests/hcs/imagexpress/__init__.py b/tests/hcs/imagexpress/__init__.py
diff --git a/tests/hcs/imagexpress/test_ImageXpress.py → ...cs/imagexpress/test_plate_acquisitions.py b/tests/hcs/imagexpress/test_ImageXpress.py → ...cs/imagexpress/test_plate_acquisitions.py
diff --git a/...xpress/test_ImageXpressWellAcquisition.py → .../hcs/imagexpress/test_well_acquisition.py b/...xpress/test_ImageXpressWellAcquisition.py → .../hcs/imagexpress/test_well_acquisition.py
diff --git a/tests/hcs/test_converter.py b/tests/hcs/test_converter.py
@@ -22,7 +22,7 @@
 from faim_ipa.stitching.tile import Tile, TilePosition
 
 
-def test_NGFFPlate():
+def test_ngff_plate():
     root_dir = "/path/to/root_dir"
     name = "plate_name"
     layout = PlateLayout.I18

diff --git a/tests/io/test_ChannelMetadata.py → tests/io/test_metadata.py b/tests/io/test_ChannelMetadata.py → tests/io/test_metadata.py
diff --git a/tests/io/test_MetaSeriesTiff.py → tests/io/test_metaseries.py b/tests/io/test_MetaSeriesTiff.py → tests/io/test_metaseries.py
diff --git a/tests/stitching/test_Tile.py b/tests/stitching/test_Tile.py
@@ -94,7 +94,7 @@ def test_get_position():
     assert tile.get_yx_position() == (2, 7)
 
 
-def test_Tile_data_mask():
+def test_tile_data_mask():
     tile = Tile(
         path="path",
         shape=(10, 10),
@@ -106,7 +106,7 @@ def test_Tile_data_mask():
     assert mask.all()
 
 
-def test_CVStackedTile_data_mask():
+def test_cellvoyager_data_mask():
     from faim_ipa.hcs.cellvoyager.tile import StackedTile
 
     tile = StackedTile(
@@ -123,7 +123,7 @@ def test_CVStackedTile_data_mask():
     assert mask[2].all()
 
 
-def test_VisiViewStackedTile_data_mask():
+def test_visiview_data_mask():
     from faim_ipa.visiview.acquisition import StackedTile
 
     tile = StackedTile(

diff --git a/tests/stitching/test_BoundingBox.py → tests/stitching/test_bounding_box.py b/tests/stitching/test_BoundingBox.py → tests/stitching/test_bounding_box.py
diff --git a/tests/stitching/test_TileStitcher.py → tests/stitching/test_dask.py b/tests/stitching/test_TileStitcher.py → tests/stitching/test_dask.py
diff --git a/tests/test_UIntHistogram.py → tests/test_histogram.py b/tests/test_UIntHistogram.py → tests/test_histogram.py
diff --git a/tests/test_MetaSeriesUtils_dask.py → tests/test_metaseries_utils_dask.py b/tests/test_MetaSeriesUtils_dask.py → tests/test_metaseries_utils_dask.py