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  1. metagenopolis/meteor metagenopolis/meteor Public

    Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform specie level taxonomic assignments and functional analysis.

    Python 12

  2. metagenopolis/CroCoDeEL metagenopolis/CroCoDeEL Public

    CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data

    Python 10

  3. metagenopolis/ESKRIM metagenopolis/ESKRIM Public

    ESKRIM is a reference-free tool that compares microbial richness in shotgun metagenomic samples by counting k-mers

    Python 4