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Cuterle v1.2.0
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@furacca furacca released this 16 Mar 15:41
· 53 commits to main since this release
v1.2.0
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Update v1.2.0

This is the v1.2.0 stable release of Cuterle, a bioinformatic tool which return an output file (extracted_domain.fasta) containing every domain annotated by InterProScan (~.tsv file) via Pfam or SMART analysis from the list of protein (~.fasta file) submitted.

New features

  • Argument command line added : see the details on readme.md for the complete review

Minor update

General

  • Code comments reorganized
  • The drawer function now has its private file -> drawer.py
  • The extracted domains' list now is more human readable

Manual and Assisted mode

  • The list of domains' name extracted can be saved in an ~.csv file

Assisted mode only

  • Improved the graphics
  • Improved the texts
  • List of files in the folders limited to 6

Manual mode only

  • Possibility of choice for the name's format of sequences in fasta output

Bug fixes

Nothing to report (yet).

Installation

# Install requirements
pip install -r requirements.txt
# Run Cuterle and follow the monitor-printed istruction
python3 main.py
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