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Cuterle v2.0.0
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@furacca furacca released this 15 Apr 11:03
· 24 commits to main since this release
v2.0.0
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Update v2.0.0

This is the v2.0.0 stable release of Cuterle, a bioinformatic tool which return an output file (extracted_domain.fasta) containing every domain annotated by InterProScan (~.tsv file) via Pfam or SMART analysis from the list of protein (~.fasta file) submitted.

New features

  • Analysis selection update: now Cuterle chooses for every sequence the analysis with more result
  • New graphical mode, just run 'main_gui.py'
  • All biggest operation became functions

Minor update

General

  • Code and code comments reorganized and rewritten

Manual and Assisted mode

  • MInor updates

Bug fixes

Nothing to report (yet).

Install the requirements in your env

# Install requirements
pip install -r requirements.txt

Usage

Manual mode (the powerful one):

# Run main.py -h to see every possible options
python3 main.py [everything you decide to do]

Assisted mode:

# Run main.py and follow the instructions printed on screen
python3 main.py

Graphical mode:

# Run main_gui.py to have a graphical view of Cuterle
python3 main_gui.py
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