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Add new datatype bcsp #19363

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Add new datatype bcsp #19363

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30cb247
add new datatype
SantaMcCloud Dec 20, 2024
9ead291
rewiev
SantaMcCloud Dec 20, 2024
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1 change: 1 addition & 0 deletions lib/galaxy/config/sample/datatypes_conf.xml.sample
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Expand Up @@ -1017,6 +1017,7 @@
<datatype extension="fits" type="galaxy.datatypes.binary:FITS" mimetype="application/octet-stream" display_in_upload="true" description="Flexible Image Transport System (FITS) used in Astronomy"/>
<datatype extension="chain" type="galaxy.datatypes.chain:Chain" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/chain.html"/>
<datatype extension="ucsc.net" type="galaxy.datatypes.chain:Net" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/net.html"/>
<datatype extension="bcsp" type="galaxy.datatypes.binary:bcsp" display_in_upload="true"/>
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You can do it similar to here, just subclass the Binary datatype.

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9ead291

</registration>
<sniffers>
<!--
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5 changes: 5 additions & 0 deletions lib/galaxy/datatypes/binary.py
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Expand Up @@ -4747,3 +4747,8 @@ def display_peek(self, dataset: DatasetProtocol) -> str:
return dataset.peek
except Exception:
return f"Binary numpy file ({nice_size(dataset.get_size())})"

class bcsp(Binary):
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You don't need to do that.

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So i can delete this?

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9ead291

"""Class for a *.bscp file"""

file_ext = "bcsp"
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