Merge pull request #26837 from geneontology/issue-25262

Obsoleted 1 term with replacement. Fixes #25262

src/ontology/go-edit.obo

@@ -83198,16 +83198,18 @@ id: GO:0008835
 name: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
 namespace: molecular_function
 alt_id: GO:0008485
-def: "Catalysis of the reaction: 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O + H+ = 5-amino-6-(5-phosphoribosylamino)uracil + NH4." [EC:3.5.4.26, RHEA:21868]
+def: "Catalysis of the reaction: 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O + H+ = 5-amino-6-(5-phosphoribosylamino)uracil + NH4." [EC:3.5.4.26, PMID:11889103, RHEA:21868]
 synonym: "2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate deaminase activity" EXACT []
 synonym: "2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine 2-aminohydrolase activity" RELATED [EC:3.5.4.26]
 synonym: "2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 2-aminohydrolase activity" RELATED [EC:3.5.4.26]
 xref: EC:3.5.4.26
 xref: KEGG_REACTION:R03459
 xref: MetaCyc:RIBOFLAVINSYNDEAM-RXN
+xref: MetaCyc:RXN-10058
 xref: RHEA:21868
 is_a: GO:0016814 ! hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
 is_a: GO:0019239 ! deaminase activity
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/25262" xsd:anyURI
 
 [Term]
 id: GO:0008836
@@ -248245,14 +248247,17 @@ is_a: GO:0016831 ! carboxy-lyase activity
 
 [Term]
 id: GO:0043723
-name: 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity
+name: obsolete 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity
 namespace: molecular_function
 alt_id: GO:0017173
-def: "Catalysis of the reaction: 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + ammonia." [MetaCyc:RXN-10058, PMID:11889103]
+def: "OBSOLETE. Catalysis of the reaction: 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + ammonia." [MetaCyc:RXN-10058, PMID:11889103]
+comment: The reason for obsoletion is that this term represents the same function as diaminohydroxyphosphoribosylaminopyrimidine deaminase activity.
 synonym: "2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase activity" EXACT [MetaCyc:YOL066C-MONOMER]
 synonym: "DRAP deaminase activity" EXACT []
 xref: MetaCyc:RXN-10058
-is_a: GO:0016814 ! hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/25262" xsd:anyURI
+is_obsolete: true
+replaced_by: GO:0008835
 
 [Term]
 id: GO:0043724