Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add term Chicken-wire-like collagen network #29401

Open
DaiqingChen opened this issue Dec 9, 2024 · 4 comments
Open

Add term Chicken-wire-like collagen network #29401

DaiqingChen opened this issue Dec 9, 2024 · 4 comments
Assignees
Labels

Comments

@DaiqingChen
Copy link

DaiqingChen commented Dec 9, 2024

20241217_MatriGO Framework_DC_AN 7.pdf

  • Suggested term label:
    Chicken-wire-like collagen network

  • Definition (free text)
    Network-forming collagens can either form a chicken-wire-like network or a hexagonal network. Collagen type IV forms a chicken-wire-like structure and is found in the basement membrane (GO:0005604).

  • Reference, in format PMID:#######
    PMID: 21421911; PMID: 31387942; PMID: 21421915

  • Gene product name and ID to be annotated to this term
    annotations of collagen type IV trimer (GO:0005587)
    (COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6)

  • Parent term(s)
    Collagenous component of basement membrane (NTR Add term Collagenous component of basement membrane #29472), collagen network(GO:0098645)

  • Children terms (if applicable)
    collagen type IV trimer (GO:0005587)

  • Synonyms (please specify, EXACT, BROAD, NARROW or RELATED)
    Collagen network, collagen sheet

  • Cross-references

  • Any other information
    See slides 1, 3, and 7: https://docs.google.com/presentation/d/1zxL0gt5vOynmJsS8BP-Xqs_0sTaEB8Zo/edit?usp=sharing&ouid=109267399050361021326&rtpof=true&sd=true


Slide screenshots:
Image


Image
Image
@DaiqingChen DaiqingChen changed the title Add term Chicken-wire network collagen Add term Chicken-wire like collagen network Dec 9, 2024
@pgaudet
Copy link
Contributor

pgaudet commented Dec 10, 2024

Hi @DaiqingChen
Can you please provide a reference for this new term?

@DaiqingChen
Copy link
Author

Hi Pascale, I can't find the PMID of the reference, it's from a book chapter: Kaur, Jasvir. (2015). Stem Cell Biology and Tissue Engineering in Dental Sciences || Extracellular Matrix (ECM) Molecules. , (), 25–45. doi:10.1016/B978-0-12-397157-9.00003-5 
Can I put the doi?

@pgaudet
Copy link
Contributor

pgaudet commented Dec 13, 2024

es, DOIs work. Thanks !

@Matrisome
Copy link

@pgaudet I added a few PMIDs to support this NTR

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

No branches or pull requests

3 participants