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Obsoleted 3 nopaline process terms; #28389 #28458

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Jul 10, 2024
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Obsoleted 3 nopaline process terms; #28389 #28458

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30 changes: 15 additions & 15 deletions src/ontology/go-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -143760,15 +143760,15 @@ intersection_of: has_primary_input CHEBI:46912 ! ornithinium(1+)

[Term]
id: GO:0019468
name: nopaline catabolic process
name: obsolete nopaline catabolic process
namespace: biological_process
def: "The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative." [GOC:jl, ISBN:0198506732]
def: "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative." [GOC:jl, ISBN:0198506732]
comment: The reason for obsoletion is that this term represents a molecular function.
synonym: "nopaline breakdown" EXACT []
synonym: "nopaline catabolism" EXACT []
synonym: "nopaline degradation" EXACT []
xref: MetaCyc:NOPALINEDEG-PWY
intersection_of: GO:0009056 ! catabolic process
intersection_of: has_primary_input CHEBI:58074 ! D-nopalinate(1-)
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28389" xsd:anyURI
is_obsolete: true

[Term]
id: GO:0019469
Expand Down Expand Up @@ -237182,15 +237182,14 @@ intersection_of: has_primary_input CHEBI:18153 ! ethene

[Term]
id: GO:0042458
name: nopaline catabolic process to proline
name: obsolete nopaline catabolic process to proline
namespace: biological_process
def: "The chemical reactions and pathways resulting in the breakdown of nopaline into other compounds, including proline." [GOC:go_curators]
def: "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline into other compounds, including proline." [GOC:go_curators]
comment: The reason for obsoletion is that this term represents a molecular function.
synonym: "nopaline breakdown to proline" EXACT []
synonym: "nopaline degradation to proline" EXACT []
xref: MetaCyc:NOPALINEDEG-PWY
intersection_of: GO:0009056 ! catabolic process
intersection_of: has_primary_input CHEBI:58074 ! D-nopalinate(1-)
intersection_of: has_primary_output CHEBI:32871 ! prolinate
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28389" xsd:anyURI
is_obsolete: true

[Term]
id: GO:0042459
Expand Down Expand Up @@ -277214,12 +277213,13 @@ intersection_of: has_primary_input_or_output CHEBI:29748 ! chorismate(2-)

[Term]
id: GO:0046418
name: nopaline metabolic process
name: obsolete nopaline metabolic process
namespace: biological_process
def: "The chemical reactions and pathways involving nopaline, (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative." [GOC:ai]
def: "OBSOLETE. The chemical reactions and pathways involving nopaline, (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative." [GOC:ai]
comment: The reason for obsoletion is that this term represents a molecular function.
synonym: "nopaline metabolism" EXACT []
intersection_of: GO:0008152 ! metabolic process
intersection_of: has_primary_input_or_output CHEBI:58074 ! D-nopalinate(1-)
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28389" xsd:anyURI
is_obsolete: true

[Term]
id: GO:0046419
Expand Down
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