renamed and moved cellular metabolic, biosynthetic, or catabolic proc…

[edwong57]

…ess terms for #28908

[github-actions]

Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-09-26/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-09-26/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

1,2,4-trichlorobenzene catabolic process http://purl.obolibrary.org/obo/GO_0018911

Added

• 1,2,4-trichlorobenzene catabolic process SubClassOf cellular organohalogen metabolic process

1,4-dichlorobenzene catabolic process http://purl.obolibrary.org/obo/GO_0019261

Added

• 1,4-dichlorobenzene catabolic process SubClassOf cellular organohalogen metabolic process

1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one metabolic process http://purl.obolibrary.org/obo/GO_0031147

Added

• 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one metabolic process SubClassOf cellular organohalogen metabolic process

2,4,5-trichlorophenoxyacetic acid metabolic process http://purl.obolibrary.org/obo/GO_0018980

Added

• 2,4,5-trichlorophenoxyacetic acid metabolic process SubClassOf cellular organohalogen metabolic process

2,4-dichlorobenzoate metabolic process http://purl.obolibrary.org/obo/GO_0018898

Added

• 2,4-dichlorobenzoate metabolic process SubClassOf cellular organohalogen metabolic process

2,4-dichlorophenoxyacetic acid metabolic process http://purl.obolibrary.org/obo/GO_0018901

Added

• 2,4-dichlorophenoxyacetic acid metabolic process SubClassOf cellular organohalogen metabolic process

2-chloro-N-isopropylacetanilide metabolic process http://purl.obolibrary.org/obo/GO_0018889

Added

• 2-chloro-N-isopropylacetanilide metabolic process SubClassOf cellular organohalogen metabolic process

3-chloroacrylic acid metabolic process http://purl.obolibrary.org/obo/GO_0018888

Added

• 3-chloroacrylic acid metabolic process SubClassOf cellular organohalogen metabolic process

3-chlorocatechol metabolic process http://purl.obolibrary.org/obo/GO_1901167

Added

• 3-chlorocatechol metabolic process SubClassOf cellular organohalogen metabolic process

aldehyde catabolic process http://purl.obolibrary.org/obo/GO_0046185

Removed

• aldehyde catabolic process SubClassOf cellular catabolic process

Added

• aldehyde catabolic process SubClassOf catabolic process

alkane catabolic process http://purl.obolibrary.org/obo/GO_0043448

Removed

• alkane catabolic process SubClassOf cellular catabolic process

alkene catabolic process http://purl.obolibrary.org/obo/GO_0043451

Removed

• alkene catabolic process SubClassOf cellular catabolic process

amyloid-beta clearance by cellular catabolic process http://purl.obolibrary.org/obo/GO_0150094

Removed

• amyloid-beta clearance by cellular catabolic process SubClassOf cellular catabolic process

Added

• amyloid-beta clearance by cellular catabolic process EquivalentTo catabolic process and (has primary input some amyloid-beta)

• amyloid-beta clearance by cellular catabolic process SubClassOf amyloid-beta metabolic process

• amyloid-beta clearance by cellular catabolic process SubClassOf catabolic process

• amyloid-beta clearance by cellular catabolic process SubClassOf has primary input some amyloid-beta

atrazine metabolic process http://purl.obolibrary.org/obo/GO_0018873

Added

• atrazine metabolic process SubClassOf cellular organohalogen metabolic process

autophagy http://purl.obolibrary.org/obo/GO_0006914

Removed

• autophagy SubClassOf cellular catabolic process

Added

• autophagy SubClassOf catabolic process

bromoxynil metabolic process http://purl.obolibrary.org/obo/GO_0018881

Added

• bromoxynil metabolic process SubClassOf cellular organohalogen metabolic process

cell septum edging catabolic process http://purl.obolibrary.org/obo/GO_0030995

Removed

• cell septum edging catabolic process SubClassOf cellular catabolic process

cellular aldehyde metabolic process http://purl.obolibrary.org/obo/GO_0006081

Removed

• cellular aldehyde metabolic process label "cellular aldehyde metabolic process"

Added

• cellular aldehyde metabolic process label "aldehyde metabolic process"

• cellular aldehyde metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular alkane metabolic process http://purl.obolibrary.org/obo/GO_0043446

Removed

• cellular alkane metabolic process label "cellular alkane metabolic process"

Added

• cellular alkane metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular alkane metabolic process label "alkane metabolic process"

cellular alkene metabolic process http://purl.obolibrary.org/obo/GO_0043449

Removed

• cellular alkene metabolic process label "cellular alkene metabolic process"

Added

• cellular alkene metabolic process label "alkene metabolic process"

• cellular alkene metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular alkyne metabolic process http://purl.obolibrary.org/obo/GO_0043452

Removed

• cellular alkyne metabolic process label "cellular alkyne metabolic process"

Added

• cellular alkyne metabolic process label "alkyne metabolic process"

• cellular alkyne metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular ketone metabolic process http://purl.obolibrary.org/obo/GO_0042180

Removed

• cellular ketone metabolic process label "cellular ketone metabolic process"

• cellular ketone metabolic process SubClassOf small molecule metabolic process

Added

• cellular ketone metabolic process label "ketone metabolic process"

• cellular ketone metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular ketone metabolic process SubClassOf metabolic process

cellular lipid catabolic process http://purl.obolibrary.org/obo/GO_0044242

Removed

• cellular lipid catabolic process SubClassOf cellular catabolic process

Added

• cellular lipid catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular modified amino acid biosynthetic process http://purl.obolibrary.org/obo/GO_0042398

Removed

• cellular modified amino acid biosynthetic process label "cellular modified amino acid biosynthetic process"

Added

• cellular modified amino acid biosynthetic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular modified amino acid biosynthetic process label "modified amino acid biosynthetic process"

cellular modified amino acid catabolic process http://purl.obolibrary.org/obo/GO_0042219

Removed

• cellular modified amino acid catabolic process has_exact_synonym "modified amino acid catabolic process"

  • database_cross_reference "GOC:mah"

• cellular modified amino acid catabolic process label "cellular modified amino acid catabolic process"

Added

• cellular modified amino acid catabolic process has_exact_synonym "cellular modified amino acid catabolic process"

  • database_cross_reference "GOC:mah"

• cellular modified amino acid catabolic process label "modified amino acid catabolic process"

• cellular modified amino acid catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular modified amino acid metabolic process http://purl.obolibrary.org/obo/GO_0006575

Removed

• cellular modified amino acid metabolic process label "cellular modified amino acid metabolic process"

• cellular modified amino acid metabolic process has_exact_synonym "modified amino acid metabolic process"

  • database_cross_reference "GOC:mah"

Added

• cellular modified amino acid metabolic process label "modified amino acid metabolic process"

• cellular modified amino acid metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular modified amino acid metabolic process has_exact_synonym "cellular modified amino acid metabolic process"

  • database_cross_reference "GOC:mah"

cellular modified histidine biosynthetic process http://purl.obolibrary.org/obo/GO_0052703

Removed

• cellular modified histidine biosynthetic process label "cellular modified histidine biosynthetic process"

• cellular modified histidine biosynthetic process definition "The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid."

  • database_cross_reference "GOC:ai"

Added

• cellular modified histidine biosynthetic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular modified histidine biosynthetic process label "modified histidine biosynthetic process"

• cellular modified histidine biosynthetic process definition "The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid within a cell."

  • database_cross_reference "GOC:ai"

cellular modified histidine catabolic process http://purl.obolibrary.org/obo/GO_0052702

Removed

• cellular modified histidine catabolic process label "cellular modified histidine catabolic process"

• cellular modified histidine catabolic process has_exact_synonym "modified histidine catabolic process"

Added

• cellular modified histidine catabolic process label "modified histidine catabolic process"

• cellular modified histidine catabolic process has_exact_synonym "cellular modified histidine catabolic process"

• cellular modified histidine catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular modified histidine metabolic process http://purl.obolibrary.org/obo/GO_0052701

Removed

• cellular modified histidine metabolic process has_exact_synonym "modified histidine metabolic process"

• cellular modified histidine metabolic process label "cellular modified histidine metabolic process"

Added

• cellular modified histidine metabolic process has_exact_synonym "cellular modified histidine metabolic process"

• cellular modified histidine metabolic process label "modified histidine metabolic process"

• cellular modified histidine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

cellular organofluorine metabolic process http://purl.obolibrary.org/obo/GO_0090346

Removed

• cellular organofluorine metabolic process label "cellular organofluorine metabolic process"

Added

• cellular organofluorine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular organofluorine metabolic process label "organofluorine metabolic process"

• cellular organofluorine metabolic process EquivalentTo metabolic process and (has primary input or output some organofluorine compound)

• cellular organofluorine metabolic process SubClassOf has primary input or output some organofluorine compound

cellular organohalogen metabolic process http://purl.obolibrary.org/obo/GO_0090345

Removed

• cellular organohalogen metabolic process label "cellular organohalogen metabolic process"

Added

• cellular organohalogen metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• cellular organohalogen metabolic process label "organohalogen metabolic process"

• cellular organohalogen metabolic process EquivalentTo metabolic process and (has primary input or output some organohalogen compound)

• cellular organohalogen metabolic process SubClassOf has primary input or output some organohalogen compound

chlorobenzene catabolic process http://purl.obolibrary.org/obo/GO_0018914

Added

• chlorobenzene catabolic process SubClassOf cellular organohalogen metabolic process

glycerol ether catabolic process http://purl.obolibrary.org/obo/GO_0044269

Removed

• glycerol ether catabolic process SubClassOf cellular catabolic process

griseofulvin biosynthetic process http://purl.obolibrary.org/obo/GO_0140878

Added

• griseofulvin biosynthetic process SubClassOf cellular organohalogen metabolic process

halogenated hydrocarbon metabolic process http://purl.obolibrary.org/obo/GO_0042197

Added

• halogenated hydrocarbon metabolic process SubClassOf cellular organohalogen metabolic process

hydrogen peroxide catabolic process http://purl.obolibrary.org/obo/GO_0042744

Removed

• hydrogen peroxide catabolic process SubClassOf cellular catabolic process

Added

• hydrogen peroxide catabolic process SubClassOf catabolic process

iprodione metabolic process http://purl.obolibrary.org/obo/GO_0018922

Added

• iprodione metabolic process SubClassOf cellular organohalogen metabolic process

ketone biosynthetic process http://purl.obolibrary.org/obo/GO_0042181

Removed

• ketone biosynthetic process SubClassOf cellular biosynthetic process

ketone body catabolic process http://purl.obolibrary.org/obo/GO_0046952

Removed

• ketone body catabolic process SubClassOf cellular catabolic process

ketone catabolic process http://purl.obolibrary.org/obo/GO_0042182

Removed

• ketone catabolic process SubClassOf cellular catabolic process

methyl fluoride metabolic process http://purl.obolibrary.org/obo/GO_0018929

Added

• methyl fluoride metabolic process SubClassOf cellular organofluorine metabolic process

negative regulation of 'de novo' NAD biosynthetic process from tryptophan http://purl.obolibrary.org/obo/GO_1905013

Added

• negative regulation of 'de novo' NAD biosynthetic process from tryptophan SubClassOf negative regulation of amine metabolic process

negative regulation of androst-4-ene-3,17-dione biosynthetic process http://purl.obolibrary.org/obo/GO_1903455

Removed

• negative regulation of androst-4-ene-3,17-dione biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of asperthecin biosynthetic process http://purl.obolibrary.org/obo/GO_1900380

Removed

• negative regulation of asperthecin biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of autophagy http://purl.obolibrary.org/obo/GO_0010507

Removed

• negative regulation of autophagy SubClassOf negative regulation of cellular catabolic process

Added

• negative regulation of autophagy SubClassOf negative regulation of catabolic process

negative regulation of cellular amino acid metabolic process http://purl.obolibrary.org/obo/GO_0045763

Removed

• negative regulation of cellular amino acid metabolic process label "negative regulation of cellular amino acid metabolic process"

• negative regulation of cellular amino acid metabolic process SubClassOf negative regulation of amine metabolic process

Added

• negative regulation of cellular amino acid metabolic process label "negative regulation of amino acid metabolic process"

• negative regulation of cellular amino acid metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• negative regulation of cellular amino acid metabolic process SubClassOf negative regulation of metabolic process

negative regulation of cellular organofluorine metabolic process http://purl.obolibrary.org/obo/GO_0090350

Removed

• negative regulation of cellular organofluorine metabolic process label "negative regulation of cellular organofluorine metabolic process"

Added

• negative regulation of cellular organofluorine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• negative regulation of cellular organofluorine metabolic process label "negative regulation of organofluorine metabolic process"

negative regulation of cellular organohalogen metabolic process http://purl.obolibrary.org/obo/GO_0090349

Removed

• negative regulation of cellular organohalogen metabolic process label "negative regulation of cellular organohalogen metabolic process"

Added

• negative regulation of cellular organohalogen metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• negative regulation of cellular organohalogen metabolic process label "negative regulation of organohalogen metabolic process"

negative regulation of ecdysteroid biosynthetic process http://purl.obolibrary.org/obo/GO_0045997

Added

• negative regulation of ecdysteroid biosynthetic process SubClassOf negative regulation of small molecule metabolic process

negative regulation of ecdysteroid metabolic process http://purl.obolibrary.org/obo/GO_0045965

Removed

• negative regulation of ecdysteroid metabolic process SubClassOf negative regulation of small molecule metabolic process

negative regulation of emodin biosynthetic process http://purl.obolibrary.org/obo/GO_1900665

Removed

• negative regulation of emodin biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of hydrogen peroxide catabolic process http://purl.obolibrary.org/obo/GO_2000296

Removed

• negative regulation of hydrogen peroxide catabolic process SubClassOf negative regulation of cellular catabolic process

Added

• negative regulation of hydrogen peroxide catabolic process SubClassOf negative regulation of catabolic process

negative regulation of indoleacetic acid biosynthetic process via tryptophan http://purl.obolibrary.org/obo/GO_1901997

Added

• negative regulation of indoleacetic acid biosynthetic process via tryptophan SubClassOf negative regulation of amine metabolic process

negative regulation of kojic acid biosynthetic process http://purl.obolibrary.org/obo/GO_1900395

Removed

• negative regulation of kojic acid biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of naphtho-gamma-pyrone biosynthetic process http://purl.obolibrary.org/obo/GO_1900847

Removed

• negative regulation of naphtho-gamma-pyrone biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

Added

• negative regulation of naphtho-gamma-pyrone biosynthetic process SubClassOf negative regulation of biosynthetic process

negative regulation of tensidol A biosynthetic process http://purl.obolibrary.org/obo/GO_1900708

Removed

• negative regulation of tensidol A biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of testosterone biosynthetic process http://purl.obolibrary.org/obo/GO_2000225

Removed

• negative regulation of testosterone biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

negative regulation of toluene catabolic process http://purl.obolibrary.org/obo/GO_1901435

Removed

• negative regulation of toluene catabolic process SubClassOf negative regulation of cellular catabolic process

Added

• negative regulation of toluene catabolic process SubClassOf negative regulation of catabolic process

negative regulation of ubiquinone biosynthetic process http://purl.obolibrary.org/obo/GO_1904774

Removed

• negative regulation of ubiquinone biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

Added

• negative regulation of ubiquinone biosynthetic process SubClassOf negative regulation of biosynthetic process

negative regulation of xanthone-containing compound biosynthetic process http://purl.obolibrary.org/obo/GO_1900184

Removed

• negative regulation of xanthone-containing compound biosynthetic process SubClassOf negative regulation of cellular biosynthetic process

Added

• negative regulation of xanthone-containing compound biosynthetic process SubClassOf negative regulation of biosynthetic process

ochratoxin A metabolic process http://purl.obolibrary.org/obo/GO_1900816

Added

• ochratoxin A metabolic process SubClassOf cellular organohalogen metabolic process

organofluorine compound http://purl.obolibrary.org/obo/CHEBI_37143

Added

• Class: organofluorine compound

organohalogen compound http://purl.obolibrary.org/obo/CHEBI_17792

Added

• Class: organohalogen compound

pentachlorophenol metabolic process http://purl.obolibrary.org/obo/GO_0018961

Added

• pentachlorophenol metabolic process SubClassOf cellular organohalogen metabolic process

positive regulation of amino acid metabolic process http://purl.obolibrary.org/obo/GO_0045764

Removed

• positive regulation of amino acid metabolic process SubClassOf positive regulation of amine metabolic process

Added

• positive regulation of amino acid metabolic process SubClassOf positive regulation of metabolic process

positive regulation of androst-4-ene-3,17-dione biosynthetic process http://purl.obolibrary.org/obo/GO_1903456

Removed

• positive regulation of androst-4-ene-3,17-dione biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of asperthecin biosynthetic process http://purl.obolibrary.org/obo/GO_1900381

Removed

• positive regulation of asperthecin biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of autophagy http://purl.obolibrary.org/obo/GO_0010508

Removed

• positive regulation of autophagy SubClassOf positive regulation of cellular catabolic process

Added

• positive regulation of autophagy SubClassOf positive regulation of catabolic process

positive regulation of ecdysteroid biosynthetic process http://purl.obolibrary.org/obo/GO_0045998

Added

• positive regulation of ecdysteroid biosynthetic process SubClassOf positive regulation of small molecule metabolic process

positive regulation of ecdysteroid metabolic process http://purl.obolibrary.org/obo/GO_0045966

Removed

• positive regulation of ecdysteroid metabolic process SubClassOf positive regulation of small molecule metabolic process

positive regulation of emodin biosynthetic process http://purl.obolibrary.org/obo/GO_1900666

Removed

• positive regulation of emodin biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of hydrogen peroxide catabolic process http://purl.obolibrary.org/obo/GO_1903285

Removed

• positive regulation of hydrogen peroxide catabolic process SubClassOf positive regulation of cellular catabolic process

Added

• positive regulation of hydrogen peroxide catabolic process SubClassOf positive regulation of catabolic process

positive regulation of kojic acid biosynthetic process http://purl.obolibrary.org/obo/GO_1900396

Removed

• positive regulation of kojic acid biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of naphtho-gamma-pyrone biosynthetic process http://purl.obolibrary.org/obo/GO_1900848

Removed

• positive regulation of naphtho-gamma-pyrone biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

Added

• positive regulation of naphtho-gamma-pyrone biosynthetic process SubClassOf positive regulation of biosynthetic process

positive regulation of tensidol A biosynthetic process http://purl.obolibrary.org/obo/GO_1900709

Removed

• positive regulation of tensidol A biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of terrequinone A biosynthetic process http://purl.obolibrary.org/obo/GO_1900854

Removed

• positive regulation of terrequinone A biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

positive regulation of toluene catabolic process http://purl.obolibrary.org/obo/GO_1901436

Removed

• positive regulation of toluene catabolic process SubClassOf positive regulation of cellular catabolic process

Added

• positive regulation of toluene catabolic process SubClassOf positive regulation of catabolic process

positive regulation of tryptophan metabolic process http://purl.obolibrary.org/obo/GO_0090358

Added

• positive regulation of tryptophan metabolic process SubClassOf positive regulation of amine metabolic process

positive regulation of ubiquinone biosynthetic process http://purl.obolibrary.org/obo/GO_1904775

Removed

• positive regulation of ubiquinone biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

Added

• positive regulation of ubiquinone biosynthetic process SubClassOf positive regulation of biosynthetic process

positive regulation of xanthone-containing compound biosynthetic process http://purl.obolibrary.org/obo/GO_1900185

Removed

• positive regulation of xanthone-containing compound biosynthetic process SubClassOf positive regulation of cellular biosynthetic process

Added

• positive regulation of xanthone-containing compound biosynthetic process SubClassOf positive regulation of biosynthetic process

regulation of 1-aminocyclopropane-1-carboxylate metabolic process http://purl.obolibrary.org/obo/GO_0010602

Added

• regulation of 1-aminocyclopropane-1-carboxylate metabolic process SubClassOf regulation of small molecule metabolic process

regulation of L-dopa biosynthetic process http://purl.obolibrary.org/obo/GO_1903195

Added

• regulation of L-dopa biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of L-leucine biosynthetic process http://purl.obolibrary.org/obo/GO_2001276

Added

• regulation of L-leucine biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of acetate catabolic process http://purl.obolibrary.org/obo/GO_0045734

Added

• regulation of acetate catabolic process SubClassOf regulation of small molecule metabolic process

regulation of aldosterone metabolic process http://purl.obolibrary.org/obo/GO_0032344

Added

• regulation of aldosterone metabolic process SubClassOf regulation of small molecule metabolic process

regulation of arginine metabolic process http://purl.obolibrary.org/obo/GO_0000821

Added

• regulation of arginine metabolic process SubClassOf regulation of small molecule metabolic process

regulation of autophagy http://purl.obolibrary.org/obo/GO_0010506

Removed

• regulation of autophagy SubClassOf regulation of cellular catabolic process

Added

• regulation of autophagy SubClassOf regulation of catabolic process

regulation of cellular amino acid biosynthetic process http://purl.obolibrary.org/obo/GO_2000282

Removed

• regulation of cellular amino acid biosynthetic process has_exact_synonym "regulation of amino acid biosynthetic process"

  • database_cross_reference "GOC:obol"

• regulation of cellular amino acid biosynthetic process label "regulation of cellular amino acid biosynthetic process"

Added

• regulation of cellular amino acid biosynthetic process has_exact_synonym "regulation of cellular amino acid biosynthetic process"

  • database_cross_reference "GOC:obol"

• regulation of cellular amino acid biosynthetic process label "regulation of amino acid biosynthetic process"

• regulation of cellular amino acid biosynthetic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

regulation of cellular amino acid metabolic process http://purl.obolibrary.org/obo/GO_0006521

Removed

• regulation of cellular amino acid metabolic process label "regulation of cellular amino acid metabolic process"

• regulation of cellular amino acid metabolic process SubClassOf regulation of cellular ketone metabolic process

• regulation of cellular amino acid metabolic process SubClassOf regulation of amine metabolic process

Added

• regulation of cellular amino acid metabolic process label "regulation of amino acid metabolic process"

• regulation of cellular amino acid metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

regulation of cellular glucuronidation http://purl.obolibrary.org/obo/GO_2001029

Added

• regulation of cellular glucuronidation SubClassOf regulation of small molecule metabolic process

regulation of cellular ketone metabolic process http://purl.obolibrary.org/obo/GO_0010565

Removed

• regulation of cellular ketone metabolic process label "regulation of cellular ketone metabolic process"

• regulation of cellular ketone metabolic process SubClassOf regulation of cellular metabolic process

• regulation of cellular ketone metabolic process SubClassOf regulation of small molecule metabolic process

Added

• regulation of cellular ketone metabolic process label "regulation of ketone metabolic process"

• regulation of cellular ketone metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• regulation of cellular ketone metabolic process SubClassOf regulation of metabolic process

regulation of cellular organofluorine metabolic process http://purl.obolibrary.org/obo/GO_0090348

Removed

• regulation of cellular organofluorine metabolic process label "regulation of cellular organofluorine metabolic process"

Added

• regulation of cellular organofluorine metabolic process label "regulation of organofluorine metabolic process"

• regulation of cellular organofluorine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

regulation of cellular organohalogen metabolic process http://purl.obolibrary.org/obo/GO_0090347

Removed

• regulation of cellular organohalogen metabolic process label "regulation of cellular organohalogen metabolic process"

Added

• regulation of cellular organohalogen metabolic process label "regulation of organohalogen metabolic process"

• regulation of cellular organohalogen metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

regulation of citrulline biosynthetic process http://purl.obolibrary.org/obo/GO_1903248

Added

• regulation of citrulline biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of fatty acid metabolic process http://purl.obolibrary.org/obo/GO_0019217

Added

• regulation of fatty acid metabolic process SubClassOf regulation of small molecule metabolic process

regulation of ferulate catabolic process http://purl.obolibrary.org/obo/GO_1901466

Added

• regulation of ferulate catabolic process SubClassOf regulation of small molecule metabolic process

regulation of fumonisin biosynthetic process http://purl.obolibrary.org/obo/GO_1900683

Added

• regulation of fumonisin biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of gamma-aminobutyric acid catabolic process http://purl.obolibrary.org/obo/GO_1901715

Added

• regulation of gamma-aminobutyric acid catabolic process SubClassOf regulation of small molecule metabolic process

regulation of gerfelin biosynthetic process http://purl.obolibrary.org/obo/GO_1900686

Added

• regulation of gerfelin biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of gibberellin biosynthetic process http://purl.obolibrary.org/obo/GO_0010371

Added

• regulation of gibberellin biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of glutamine family amino acid metabolic process http://purl.obolibrary.org/obo/GO_0000820

Added

• regulation of glutamine family amino acid metabolic process SubClassOf regulation of small molecule metabolic process

regulation of glyoxylate cycle http://purl.obolibrary.org/obo/GO_2000874

Added

• regulation of glyoxylate cycle SubClassOf regulation of small molecule metabolic process

regulation of histidine biosynthetic process http://purl.obolibrary.org/obo/GO_0120213

Added

• regulation of histidine biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of homoserine biosynthetic process http://purl.obolibrary.org/obo/GO_1901710

Added

• regulation of homoserine biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of hydrogen peroxide catabolic process http://purl.obolibrary.org/obo/GO_2000295

Removed

• regulation of hydrogen peroxide catabolic process SubClassOf regulation of cellular catabolic process

Added

• regulation of hydrogen peroxide catabolic process SubClassOf regulation of catabolic process

regulation of ketone biosynthetic process http://purl.obolibrary.org/obo/GO_0010566

Added

• regulation of ketone biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of ketone catabolic process http://purl.obolibrary.org/obo/GO_0010567

Removed

• regulation of ketone catabolic process SubClassOf regulation of cellular catabolic process

Added

• regulation of ketone catabolic process SubClassOf regulation of catabolic process

• regulation of ketone catabolic process SubClassOf regulation of small molecule metabolic process

regulation of lysine biosynthetic process via aminoadipic acid http://purl.obolibrary.org/obo/GO_1902986

Added

• regulation of lysine biosynthetic process via aminoadipic acid SubClassOf regulation of small molecule metabolic process

regulation of methane biosynthetic process from formic acid http://purl.obolibrary.org/obo/GO_1900339

Added

• regulation of methane biosynthetic process from formic acid SubClassOf regulation of small molecule metabolic process

regulation of o-orsellinic acid biosynthetic process http://purl.obolibrary.org/obo/GO_1900698

Added

• regulation of o-orsellinic acid biosynthetic process SubClassOf regulation of small molecule metabolic process

regulation of ornithine metabolic process http://purl.obolibrary.org/obo/GO_0090368

Added

• regulation of ornithine metabolic process SubClassOf regulation of small molecule metabolic process

regulation of penicillin metabolic process http://purl.obolibrary.org/obo/GO_0033244

Added

• regulation of penicillin metabolic process SubClassOf regulation of small molecule metabolic process

regulation of salicylic acid metabolic process http://purl.obolibrary.org/obo/GO_0010337

Added

• regulation of salicylic acid metabolic process SubClassOf regulation of small molecule metabolic process

regulation of selenocysteine metabolic process http://purl.obolibrary.org/obo/GO_1905825

Added

• regulation of selenocysteine metabolic process SubClassOf regulation of small molecule metabolic process

regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA http://purl.obolibrary.org/obo/GO_1901413

Added

• regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA SubClassOf regulation of small molecule metabolic process

regulation of toluene catabolic process http://purl.obolibrary.org/obo/GO_1901434

Removed

• regulation of toluene catabolic process SubClassOf regulation of cellular catabolic process

Added

• regulation of toluene catabolic process SubClassOf regulation of catabolic process

regulation of tryptophan metabolic process http://purl.obolibrary.org/obo/GO_0090357

Added

• regulation of tryptophan metabolic process SubClassOf regulation of small molecule metabolic process

• regulation of tryptophan metabolic process SubClassOf regulation of amine metabolic process

vitamin catabolic process http://purl.obolibrary.org/obo/GO_0009111

Removed

• vitamin catabolic process definition "The chemical reactions and pathways resulting in the breakdown of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body."

  • database_cross_reference "GOC:ai"

• vitamin catabolic process SubClassOf cellular catabolic process

Added

• vitamin catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• vitamin catabolic process definition "The chemical reactions and pathways resulting in the breakdown of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body, carried out by individual cells."

  • database_cross_reference "GOC:ai"

xenobiotic catabolic process http://purl.obolibrary.org/obo/GO_0042178

Removed

• xenobiotic catabolic process definition "The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical."

  • database_cross_reference "GOC:jl"

  • database_cross_reference "GOC:krc"

• xenobiotic catabolic process SubClassOf cellular catabolic process

Added

• xenobiotic catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28908"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• xenobiotic catabolic process definition "The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to the organism exposed to it, carried out by individual cells. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical."

  • database_cross_reference "GOC:jl"

  • database_cross_reference "GOC:krc"

• xenobiotic catabolic process SubClassOf catabolic process