Update reaction participants

[ontobot]

Automated changes by create-pull-request GitHub action

[github-actions]

Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-12-27/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-12-27/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

3-hexaprenyl-4,5-dihydroxybenzoate http://purl.obolibrary.org/obo/CHEBI_58373

Removed

• Class: 3-hexaprenyl-4,5-dihydroxybenzoate

4-hydroxy-3-all-trans-hexaprenylbenzoate http://purl.obolibrary.org/obo/CHEBI_84492

Removed

• Class: 4-hydroxy-3-all-trans-hexaprenylbenzoate

4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity http://purl.obolibrary.org/obo/GO_0106364

Removed

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some di-mu-sulfido-diiron(2+)

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some dioxygen

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some di-mu-sulfido-diiron(1+)

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some hydron

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some water

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some 4-hydroxy-3-all-trans-hexaprenylbenzoate

• 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity SubClassOf has participant some 3-hexaprenyl-4,5-dihydroxybenzoate

5beta-cholestane-3alpha,7alpha-diol http://purl.obolibrary.org/obo/CHEBI_28047

Removed

• Class: 5beta-cholestane-3alpha,7alpha-diol

[cytochrome c]-lysine N-methyltransferase activity http://purl.obolibrary.org/obo/GO_0000277

Added

• [cytochrome c]-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• [cytochrome c]-lysine N-methyltransferase activity SubClassOf has participant some L-lysinium residue

• [cytochrome c]-lysine N-methyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

• [cytochrome c]-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• [cytochrome c]-lysine N-methyltransferase activity SubClassOf has participant some hydron

calmodulin-lysine N-methyltransferase activity http://purl.obolibrary.org/obo/GO_0018025

Added

• calmodulin-lysine N-methyltransferase activity SubClassOf has participant some hydron

• calmodulin-lysine N-methyltransferase activity SubClassOf has participant some L-lysinium residue

• calmodulin-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• calmodulin-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• calmodulin-lysine N-methyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

histone H3K27 dimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140952

Added

• histone H3K27 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K27 dimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K27 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K27 dimethyltransferase activity SubClassOf has participant some hydron

histone H3K27 monomethyltransferase activity http://purl.obolibrary.org/obo/GO_0140953

Added

• histone H3K27 monomethyltransferase activity SubClassOf has participant some hydron

• histone H3K27 monomethyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

• histone H3K27 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K27 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K27 monomethyltransferase activity SubClassOf has participant some L-lysinium residue

histone H3K27 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140951

Added

• histone H3K27 trimethyltransferase activity SubClassOf has participant some hydron

• histone H3K27 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K27 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K27 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

histone H3K36 dimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140954

Added

• histone H3K36 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K36 dimethyltransferase activity SubClassOf has participant some hydron

• histone H3K36 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K36 dimethyltransferase activity SubClassOf has participant some L-lysinium residue

histone H3K36 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140955

Added

• histone H3K36 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K36 trimethyltransferase activity SubClassOf has participant some hydron

• histone H3K36 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K36 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

histone H3K4 dimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140946

Added

• histone H3K4 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K4 dimethyltransferase activity SubClassOf has participant some hydron

• histone H3K4 dimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K4 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

histone H3K4 monomethyltransferase activity http://purl.obolibrary.org/obo/GO_0140945

Added

• histone H3K4 monomethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K4 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K4 monomethyltransferase activity SubClassOf has participant some hydron

• histone H3K4 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K4 monomethyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

histone H3K4 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140999

Added

• histone H3K4 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K4 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K4 trimethyltransferase activity SubClassOf has participant some hydron

• histone H3K4 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

histone H3K79 monomethyltransferase activity http://purl.obolibrary.org/obo/GO_0120505

Added

• histone H3K79 monomethyltransferase activity SubClassOf has participant some hydron

• histone H3K79 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K79 monomethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K79 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K79 monomethyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

histone H3K79 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140956

Added

• histone H3K79 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K79 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K79 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K79 trimethyltransferase activity SubClassOf has participant some hydron

histone H3K9 dimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140942

Added

• histone H3K9 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K9 dimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K9 dimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K9 dimethyltransferase activity SubClassOf has participant some hydron

histone H3K9 monomethyltransferase activity http://purl.obolibrary.org/obo/GO_0140948

Added

• histone H3K9 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K9 monomethyltransferase activity SubClassOf has participant some hydron

• histone H3K9 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

histone H3K9 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140949

Added

• histone H3K9 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H3K9 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K9 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K9 trimethyltransferase activity SubClassOf has participant some hydron

histone H3K9me2 methyltransferase activity http://purl.obolibrary.org/obo/GO_0140947

Added

• histone H3K9me2 methyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H3K9me2 methyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

• histone H3K9me2 methyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H3K9me2 methyltransferase activity SubClassOf has participant some hydron

• histone H3K9me2 methyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

histone H4K20 monomethyltransferase activity http://purl.obolibrary.org/obo/GO_0140944

Added

• histone H4K20 monomethyltransferase activity SubClassOf has participant some hydron

• histone H4K20 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• histone H4K20 monomethyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

• histone H4K20 monomethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H4K20 monomethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

histone H4K20 trimethyltransferase activity http://purl.obolibrary.org/obo/GO_0140943

Added

• histone H4K20 trimethyltransferase activity SubClassOf has participant some L-lysinium residue

• histone H4K20 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H4K20 trimethyltransferase activity SubClassOf has participant some hydron

• histone H4K20 trimethyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

histone H4K20me methyltransferase activity http://purl.obolibrary.org/obo/GO_0140941

Added

• histone H4K20me methyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

• histone H4K20me methyltransferase activity SubClassOf has participant some hydron

• histone H4K20me methyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• histone H4K20me methyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

protein-lysine N-methyltransferase activity http://purl.obolibrary.org/obo/GO_0016279

Removed

• protein-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-methionine zwitterion

• protein-lysine N-methyltransferase activity SubClassOf has participant some hydron

• protein-lysine N-methyltransferase activity SubClassOf has participant some L-lysinium residue

• protein-lysine N-methyltransferase activity SubClassOf has participant some S-adenosyl-L-homocysteine zwitterion

• protein-lysine N-methyltransferase activity SubClassOf has participant some N(6)-methyl-L-lysinium residue

sterol 12-alpha-hydroxylase activity http://purl.obolibrary.org/obo/GO_0008397

Added

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some water

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some 7alpha-hydroxycholest-4-en-3-one

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some FMNH2(2-)

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some dioxygen

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some hydron

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some FMN(3-)

• sterol 12-alpha-hydroxylase activity SubClassOf has participant some 7alpha,12alpha-dihydroxycholest-4-en-3-one