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A chemical entity found 'causally upstream of' a process #25

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rajshruti18 opened this issue Nov 8, 2021 · 0 comments · May be fixed by #26
Open

A chemical entity found 'causally upstream of' a process #25

rajshruti18 opened this issue Nov 8, 2021 · 0 comments · May be fixed by #26

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@rajshruti18
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rajshruti18 commented Nov 8, 2021 •
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Ran SIGNOR-AC.tsv as input through signor2gocam database and then looked for instances of 'owl:Nothing' in the output file in Protege. 84 instances were found in total. The explanation for one of those instances is as follows:

Screen Shot 2021-10-25 at 11 57 12 AM

On further investigation we found that the underlined id above is a CHEBI term (CHEBI:16618).
@rajshruti18 rajshruti18 changed the title A chemical entity found 'causally upstream of' another chemical entity A chemical entity found 'causally upstream of' a process Nov 9, 2021
@balhoff balhoff linked a pull request Dec 6, 2021 that will close this issue
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Fix logical inconsistency with small molecules. geneontology/signor2gocam
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