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Update projectR.Rmd
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rpalaganas committed Feb 21, 2024
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2 changes: 1 addition & 1 deletion vignettes/projectR.Rmd
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Expand Up @@ -105,7 +105,7 @@ pPCA <- ggplot(dPCA, aes(x=PC1, y=PC2, colour=ID.cond, shape=ID.line,
```{r projectR.prcomp, warning=FALSE}
# data to project into PCs from RNAseq6l3c3t expression data
data(p.ESepiGen4c1l)
library(ggplot2)
PCA2ESepi <- projectR(data = p.ESepiGen4c1l$mRNA.Seq,loadings=pc.RNAseq6l3c3t,
full=TRUE, dataNames=map.ESepiGen4c1l[["GeneSymbols"]])
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