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with docker
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vortexing committed Feb 1, 2022
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Package: fh.wdlR
Title: Convenience Tools for Managing WDL Workflows via Cromwell
Version: 2.0.1
Version: 2.0.3
Authors@R:
person(given = "Amy",
family = "Paguirigan",
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12 changes: 12 additions & 0 deletions docker/dockerfile
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### vortexing/fhwdlR:v2.0.3
## Pull the R base image
FROM rocker/r-base:4.1.1
# Update
RUN apt-get update
RUN apt-get install -y libssl-dev libxml2-dev libcurl4-openssl-dev
# Install required packages
RUN R -e "install.packages('remotes', dependencies = TRUE)"
# Install from github
RUN R -e "remotes::install_github('FredHutch/fh.wdlR@v2.0.3', dependencies = TRUE)"
# Override the R CMD for workflow managers
CMD ["/bin/bash"]

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