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Improving diff3 conflict quality -- reducing the prevalence of nested conflicts with recursive merges #1855

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@newren newren commented Jan 21, 2025

The idea motivating this change was that there are several types of conflicts (binary files, modify/delete resolutions, submodules, symlinks, conflicts picking two of submodule/symlink/file), where we have been able to fix bugs and improve merge quality by having the resolution for our virtual merge base choose the content from the base of the merge bases. I think using content from the base of our merge-bases can also improve our selection/creation of a virtual merge base where we have a normal content conflicts as well (not a bug fix, just an improvement in conflict quality).

This is a change that has been discussed a few times before, but only with an untested (and not-quite-correct) patch and incomplete rationale; see below for links. The implementation of this change is pretty small and straightforward, but my rationale in the second patch is pretty lengthy.

Part of the reason for that length is that I feel virtual merge bases are less well understood on this list, so I tried to provide a bit more background than normal. The other part of the reason for that length is that although I thought of this idea long ago, for a while I only understood that it seemed to definitely be a good idea in extreme cases and seemed reasonable in simple cases, but I didn't have a good framework for explaining (or understanding) why this seemed like a desirable alternative to try generally for recursive merges.

There is one part of these patches that feels suboptimal to me -- it only applies when there are two merge bases; not when there are more than two. That could be viewed as a limitation of the current implementation, but the alternative may require ditching our pairwise merging of merge-bases and coming up with some kind of N-way merge of merge-bases, which just seems unpractical to me. The second commit message tries to explain why this limitation arises given our method of merging merge-bases.

Naturally, this change also requires modifying two testcases that explicitly tested the expected conflicts for recursive merges.

Outstanding question:

  • Should this new behavior be an option, perhaps to allow wider testing, instead of just being the new behavior?

== Previous discussions ==

I originally posted this idea at
https://lore.kernel.org/git/20210611190235.1970106-1-newren@gmail.com/
but I didn't have a good framework for evaluating whether it was a good idea in general; that took me a while. In the mean time, Hannes in a later thread tested it out (or at least the original buggy version I posted with a small compile fix) and found it
gave good results for his case:
https://lore.kernel.org/git/a5267880-09be-a1ed-32bb-3b056b831fb4@kdbg.org/
mhagger also expressed some interest in the idea when I talked with him about it at Git Merge '22:
https://lore.kernel.org/git/CABPp-BFzOs7e61JZocjW0=kZYms74uqhzyqPhAL3ZDi84EwQ5Q@mail.gmail.com/

BEFORE SUBMITTING:

  • Apply same changes to merge-recursive (otherwise two testcases running merge-recursive are going to fail)
  • Add a testcase for the first patch
  • Add a testcase for the second patch where the number of merge bases is greater than 2.

Similar to XDL_MERGE_FAVOR_{OURS,THEIRS} add a new mode for favoring the
base version in the event of a conflict, and add a --base flag to
merge-file to allow testing this out.

This will be used in a subsequent commit to reduce the prevalence of
nested conflict markers in the virtual merge base when using diff3
conflict style, by having the virtual merge base (created by merging the
merge bases) favor the version from their merge base (i.e. from the merge
base of the merge bases).

Signed-off-by: Elijah Newren <newren@gmail.com>
This is a pretty small code change, but one that perhaps deserves a
lengthy explanation...

When merging, it is possible to have nested conflicts.  This most
frequently happens when using merge.conflictStyle=diff3 (or zdiff3) and
doing so in a case where there is more than one merge base.  For
example:

          L1---L2
         /  \ /  \
        B    X    ?
         \  / \  /
          R1---R2

Here on branches L and R there are many commits omitted, but L1 and R1
are both valid merge bases for a merge of L2 and R2.  This reason we end
up with two valid merge bases is because we have both a merge from L
into R and a merge from R into L (each merge occurring before or at L2
and R2, respectively).  When merging L2 and R2 using the diff3 conflict
style, today you might get a conflict of the form:

    Non-conflicting leading content
    <<<<<<< e11e11e1 (First line of commit message of L2)
    L2:conflicting region
    ||||||| merged common ancestors
    <<<<<<<<< Temporary merge branch 1
    L1:conflicting region
    ||||||||| ba5eba11
    M:conflicting region
    =========
    R1:conflicting region
    =======
    R2:conflicting region
    >>>>>>> 52525252 (First line of commit message of R2)
    Non-conflicting trailing content

where "COMMIT: conflicting region" above stands for several (or even
hundreds) of lines of content from the (relevant file of) the relevant
commit.

You could get another layer of nesting here, if you found that there was
more than one merge base of the merge bases.  In fact, the number of
layers of nesting is not limited.  In effect, the higher the depth of
recursion needed for merging, the more the "base" version in the diff3
output expands.

Reports over the years suggest the presence of nested conflicts diminish
the value of having the base version available; the greater the nesting
(and perhaps also the longer the length of each region of lines when
there is a nested conflict), the more diminished the value is.  In fact,
it might be preferable for these particular conflicts to have used
merge.conflictStyle=merge instead, i.e. to provide 0 context lines for
the base version, while still using merge.conflictStyle=diff3 for other
cases that don't have conflicts between the merge bases.

However, there is an alternative way to handle the recursive merges that
would approximate merge.conflictStyle=merge as the number of nesting
levels increases: resolve the merge of merge bases not by using a
conflicted merge of the two merge bases, but by using their base
version.

This alternative strategy works because we have some latitude in how the
virtual merge base is selected.  Using the base version of the merge
bases is something we have done before in specific contexts, and in each
case doing so fixed actual bugs.  For more details, see:
    816147e (merge-recursive: add a bunch of FIXME comments
                  documenting known bugs, 2021-03-20) -- particularly
                  the cases where resolution for merge bases are wrong
    4ef88fc (merge-ort: add handling for different types of files
                  at same path, 2021-01-01)
    c73cda7 (merge-ort: copy and adapt merge_submodule() from
                  merge-recursive.c, 2021-01-01)
    62fdec1 (merge-ort: flesh out implementation of
                  handle_content_merge(), 2021-01-01)
    ec61d14 (merge-recursive: Fix modify/delete resolution in the
                  recursive case, 2011-08-11)
    a129d96 (Allow specifying specialized merge-backend per path.,
                  2007-04-16) -- particularly the "common ancestor"
                  comment and associated code

If this explanation feels like "magic" to you, there's an alternative
rules-based approach by which we can evaluate the choice of how to
create a virtual merge base.  We want any virtual merge base to follow
these rules:

  Rule 1) If within a certain range of lines, all merge bases match
          each other, then use those lines from any of them in the
          virtual merge base.
  Rule 2) If within a certain range of lines, there is at most one
          version of those lines that does not match the merge base
          of the merge bases, then use that unique version of those
          lines in the virtual merge base.
  Rule 3) In lines of the file that disagree between two or more
          merge bases (and which also disagree with the base of the
          merge bases), fill those lines in the virtual merge base
          with something that matches none of the merge bases.

The first two rules simply let us resolve cases that are clearly
unambiguous.  The third rule may look funny but is necessary to avoid
the virtual merge base accidentally matching one of the two sides in the
outer merge.  (If the virtual merge base matches one of the two sides in
the outer merge, the merge machinery will think that side of the outer
merge made no change and thus that there is no conflict in the outer
merge, despite the fact that the two sides of the outer merge may
disagree with each other.)

If we are using merge.conflictStyle=merge, then these three rules are
sufficient; anything else we do will be irrelevant to the end result.
In that case, we could even satisfy rule 3 by ignoring the conflicting
lines and replacing them with totally random lines.  However, for
merge.conflictStyle=diff3, we want something that looks more like a
"base version" of the relevant file.  That gives us a goal for the
virtual merge base:

  Goal 4) In lines of the file falling under rule 3, try to pick
          something that looks like a base version.

For Goal 4, both merging the conflicted portions of the merge bases and
taking the base of the merge bases satisfy this goal.  Both have their
plusses and minuses.  But both become less and less useful when there is
a deeply nested recursive merge.  For a deeply nested recursive merge,
the conflicted contents gives a highly nested conflict showing every
version of the file going back to the eventual common point in history.
In contrast, the "base of the merge bases" strategy instead only gives
the single version of the file from that final common point in history.
Since codebases tend to grow over time, odds are that the more deeply
recursive the merge has to go, the smaller the context that will be
provided with the "base of the merge bases" strategy.  In the limit,
the original version of the lines far enough back in history may have
been empty, so the "base of the merge bases" strategy effectively makes
recursive merges look like merge.conflictStyle=merge for deep
recursions, while still providing some "base version" context for
more shallow recursions.  As noted near the beginning of this commit
message, having something that approaches no context in the special
cases of deep recursions is exactly what we'd prefer.  So:

  Goal 5) In lines of the file falling under Rule 3, the more deep the
          recursion is, the less likely relevant context can be kept;
          prefer small (or even empty) context regions over very
          complicated ones.

This all sounds great, but there is one gotcha -- since we iteratively
merge the merge-bases pairwise, we don't have an easy way to distinguish
between Rule 2 and Rule 3 at times.  For example, if we have three merge
bases and they all disagree on some line, the conflicted-content
solution avoids an ambiguity, but taking the "base of the merge bases"
introduces one.  In particular, for this case of three merge bases that
disagree on some line, merging the first two merge bases yields an
interim virtual merge base that matches the base, making it look like
the virtual merge base has not been modified relative to its base.  Then
when we merge the third merge base with the interim merge base, we'd
think it cleanly resolved to that line from the third merge base,
against our wishes.  Since all three merge bases differed on that line,
we'd want to use the base of the merge bases, but the pairwise merging
made that difficult.  To avoid this problem, only use the "base of the
merge bases" strategy when we have two merge bases.  That will limit
where this new virtual merge base strategy will help us, but since two
merge bases is the most common case for recursive merges, it should
still provide significant benefit.

Signed-off-by: Elijah Newren <newren@gmail.com>
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