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v2.9.0

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@vidarhr vidarhr released this 13 Aug 15:03
· 944 commits to master since this release

gor v2.9.0 contains the following features:

Readme:

  • Added reference data details
  • Added download details

Language changes:

  • Support gz compression for nor like files
  • Simplify handling of tag-bucket relations
  • Handle bgen on s3
  • Support SQL hints on GOR scripts

Improvements:

  • Refactor GorSecurityContext
  • SourceRef cleanup
  • Improvements to Range Merge Iterator
  • Improvements to filter handling in Genomic Iterator

Bug fixes:

  • VARJOIN ignores case in alleles from left file but not from right
  • GTLD optimization
  • GOR vcf.gz write needs improvement
  • Table clean up cleans too much
  • Fix plinkregression with pgor
  • BoundedIterator is created twice
  • Fix parquet write
  • Bug in CALCTYPE