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setup.py
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setup.py
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import pathlib
from setuptools import setup
# The directory containing this file
HERE = pathlib.Path(__file__).parent
# The text of the README file
README = (HERE / "README.md").read_text()
test_pckgs = [
"pytest",
"nbval",
"umap-learn",
"plotnine",
"coverage<5.0",
"pytest-cov",
"coveralls==2.2.0",
]
extras = {
"test": test_pckgs,
}
setup(
name="ponyo",
version="0.7.1",
description="Install functions to simulate gene expression compendia",
long_description=README,
long_description_content_type="text/markdown",
url="https://github.com/greenelab/ponyo",
author="Alexandra Lee",
author_email="alexjlee.21@gmail.com",
license="BSD 3-Clause",
packages=["ponyo"],
zip_safe=False,
python_requires=">=3.5, <3.8",
install_requires=[
"pandas",
"numpy",
"keras==2.3.1",
"tensorflow==1.15.4",
"scikit-learn",
"h5py<3",
],
tests_require=test_pckgs,
extras_require=extras,
)