Fix controller of infection

Fixes #192
gyorilab · Jul 6, 2023 · d084a9a · d084a9a
1 parent 34488c0
commit d084a9a
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Showing 4 changed files with 34 additions and 34 deletions.
diff --git a/notebooks/hackathon_2023.07/scenario1.ipynb b/notebooks/hackathon_2023.07/scenario1.ipynb
@@ -94,7 +94,7 @@
  "\n",
  "t1 = ControlledConversion(subject=c['S'],\n",
  " outcome=c['E'],\n",
- " controller=c['E'],\n",
+ " controller=c['I'],\n",
  " rate_law=S*I*beta / N)\n",
  "t2 = NaturalConversion(subject=c['E'],\n",
  " outcome=c['I'],\n",

diff --git a/notebooks/hackathon_2023.07/scenario1_a.json b/notebooks/hackathon_2023.07/scenario1_a.json
@@ -20,8 +20,8 @@
  }
  },
  {
- "id": "E",
- "name": "E",
+ "id": "I",
+ "name": "I",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -32,8 +32,8 @@
  }
  },
  {
- "id": "I",
- "name": "I",
+ "id": "E",
+ "name": "E",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -72,11 +72,11 @@
  {
  "id": "t1",
  "input": [
- "E",
+ "I",
  "S"
  ],
  "output": [
- "E",
+ "I",
  "E"
  ],
  "properties": {
@@ -151,16 +151,16 @@
  "expression": "5599999.00000000",
  "expression_mathml": "<cn>5599999.0</cn>"
  },
- {
- "target": "E",
- "expression": "1.00000000000000",
- "expression_mathml": "<cn>1.0</cn>"
- },
  {
  "target": "I",
  "expression": "0.0",
  "expression_mathml": "<cn>0.0</cn>"
  },
+ {
+ "target": "E",
+ "expression": "1.00000000000000",
+ "expression_mathml": "<cn>1.0</cn>"
+ },
  {
  "target": "R",
  "expression": "0.0",

diff --git a/notebooks/hackathon_2023.07/scenario1_c.json b/notebooks/hackathon_2023.07/scenario1_c.json
@@ -20,8 +20,8 @@
  }
  },
  {
- "id": "E",
- "name": "E",
+ "id": "I",
+ "name": "I",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -32,8 +32,8 @@
  }
  },
  {
- "id": "I",
- "name": "I",
+ "id": "E",
+ "name": "E",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -72,11 +72,11 @@
  {
  "id": "t1",
  "input": [
- "E",
+ "I",
  "S"
  ],
  "output": [
- "E",
+ "I",
  "E"
  ],
  "properties": {
@@ -151,16 +151,16 @@
  "expression": "5599999.00000000",
  "expression_mathml": "<cn>5599999.0</cn>"
  },
- {
- "target": "E",
- "expression": "1.00000000000000",
- "expression_mathml": "<cn>1.0</cn>"
- },
  {
  "target": "I",
  "expression": "0.0",
  "expression_mathml": "<cn>0.0</cn>"
  },
+ {
+ "target": "E",
+ "expression": "1.00000000000000",
+ "expression_mathml": "<cn>1.0</cn>"
+ },
  {
  "target": "R",
  "expression": "0.0",

diff --git a/notebooks/hackathon_2023.07/scenario1_d.json b/notebooks/hackathon_2023.07/scenario1_d.json
@@ -20,8 +20,8 @@
  }
  },
  {
- "id": "E",
- "name": "E",
+ "id": "I",
+ "name": "I",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -32,8 +32,8 @@
  }
  },
  {
- "id": "I",
- "name": "I",
+ "id": "E",
+ "name": "E",
  "grounding": {
  "identifiers": {},
  "modifiers": {}
@@ -72,11 +72,11 @@
  {
  "id": "t1",
  "input": [
- "E",
+ "I",
  "S"
  ],
  "output": [
- "E",
+ "I",
  "E"
  ],
  "properties": {
@@ -151,16 +151,16 @@
  "expression": "5599999.00000000",
  "expression_mathml": "<cn>5599999.0</cn>"
  },
- {
- "target": "E",
- "expression": "1.00000000000000",
- "expression_mathml": "<cn>1.0</cn>"
- },
  {
  "target": "I",
  "expression": "0.0",
  "expression_mathml": "<cn>0.0</cn>"
  },
+ {
+ "target": "E",
+ "expression": "1.00000000000000",
+ "expression_mathml": "<cn>1.0</cn>"
+ },
  {
  "target": "R",
  "expression": "0.0",